Documentation for PEP specification and all PEPkit software
☆10Mar 25, 2026Updated 2 weeks ago
Alternatives and similar repositories for pepspec
Users that are interested in pepspec are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Project metadata manager for PEPs in Python☆40Apr 1, 2026Updated last week
- Calculate and plot distributions of genomic ranges☆27Apr 23, 2025Updated 11 months ago
- Manager for multi-container computing environments☆26Mar 6, 2026Updated last month
- This repository contains the installation zip file, user manual, example data, and source code for the PyXlinkViewer plugin for PyMOL v2☆10Jul 3, 2023Updated 2 years ago
- Framework for building R interfaces to shell commands☆16Oct 12, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Code for reproducing results from the paper "RNA velocity and protein acceleration from single-cell multiomics experiments."☆11Feb 1, 2020Updated 6 years ago
- A Thermo XCalibur Method (.meth) file reader, extracter, and converter command-line program for mass spectrometry researchers.☆13Jan 13, 2019Updated 7 years ago
- web.py based tool to automatically convert argparse-like command line interfaces to simple web interfaces☆24Jan 11, 2017Updated 9 years ago
- Simplified script for applying the t-SNE diff method on high parameter flow cytometry data☆11Oct 31, 2023Updated 2 years ago
- Modular job submitter for arbitrary pipelines or commands.☆26Mar 26, 2026Updated 2 weeks ago
- Workflow management system for the automated and distributed analysis of large-scale experimental data.☆13Oct 3, 2024Updated last year
- LoopPredictor: Predicting unknown enhancer-mediated genome topology by an ensemble machine learning model☆14Jun 18, 2021Updated 4 years ago
- Create cwl workflows by writing a simple Python script☆40Apr 29, 2020Updated 5 years ago
- ☆12Mar 1, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Polygonal curve approximation for python☆12May 10, 2025Updated 10 months ago
- Implementation of Wasserstein Generative Adversarial Networks using Tensorflow☆12Jul 25, 2018Updated 7 years ago
- Scripts for analyzing PacBio AAV sequences☆15May 3, 2024Updated last year
- Strain resolved metagenome simulator☆13Aug 11, 2018Updated 7 years ago
- Find Co-Abundant Groups of Genes☆11Aug 3, 2020Updated 5 years ago
- Pynocular is a lightweight ORM that lets you query your database using Pydantic models and asyncio☆12May 24, 2022Updated 3 years ago
- Importing vg json graphs to Python data structures.☆12Nov 11, 2020Updated 5 years ago
- Whole genome focused array SNP typer☆14Feb 2, 2026Updated 2 months ago
- Utilities and applications for the FlatGov project by Demand Progress☆16Feb 8, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Efficient algorithms for designing orthogonal DNA sequence libraries☆13Oct 23, 2024Updated last year
- Continuously tempered Hamiltonian Monte Carlo☆12Apr 12, 2017Updated 8 years ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16May 16, 2023Updated 2 years ago
- YAML template engine☆42Nov 27, 2025Updated 4 months ago
- Spliced peptide identification from in vitro digestions of polypeptides with purified proteasomes☆10Jun 28, 2024Updated last year
- Snakemake profile for the (Sun) Grid Engine queueing system☆17Jul 13, 2023Updated 2 years ago
- XEnograft Visualization & Analysis☆11Oct 18, 2025Updated 5 months ago
- Finding CpG islands in genome sequences☆13Jul 26, 2017Updated 8 years ago
- Pipeline code for creating a fully haplotype-resolved assembly from a combination of PacBio/ONT long reads and Illumina Strand-seq data☆16Apr 2, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- The uncompromising Snakemake code formatter☆187Apr 1, 2026Updated last week
- instructor notes from Software Carpentry workshops☆10Jan 25, 2019Updated 7 years ago
- Ontology mapping for Open Targets☆22Mar 30, 2026Updated last week
- Reference genome resource manager☆74Mar 6, 2026Updated last month
- A Perl pipeline for identifying marker genes and build phylogenetic trees for a set of genomes☆14Jun 19, 2017Updated 8 years ago
- CADD-SV – a framework to score the effect of structural variants☆18Feb 11, 2026Updated last month
- Statistical Distributions from R☆12Apr 24, 2014Updated 11 years ago