Lailabcode / DeepSPLinks
DeepSP is an antibody-specific surrogate CNN model that can generate 30 spatial properties of an antibody solely based on their sequences.
☆17Updated 4 months ago
Alternatives and similar repositories for DeepSP
Users that are interested in DeepSP are comparing it to the libraries listed below
Sorting:
- ☆19Updated this week
- Scores for Hydrophobicity and Charges based on SASAs☆40Updated 6 months ago
- scripts to find PBD structures for cancer driver proteins☆31Updated last week
- Binding pocket optimization based on force fields and docking scoring functions☆37Updated 9 months ago
- ☆13Updated 2 years ago
- DSDPFlex: Flexible-Receptor Docking with GPU Acceleration☆24Updated this week
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆43Updated 3 weeks ago
- Modelling protein conformational landscape with Alphafold☆54Updated 3 months ago
- AI/ML Based QSAR Modeling and Translation to Deployable QSAR WebApps☆18Updated last month
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆13Updated last year
- ☆52Updated 7 months ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆35Updated last year
- ☆40Updated 8 months ago
- HELM-GPT: de novo macrocyclic peptide design using generative pre-trained transformer☆30Updated last year
- A Motif Hash Based Method for Matching Crosslinkers into Peptides and Proteins☆24Updated last year
- DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…☆18Updated 4 months ago
- Clustering of SES virtual probes for pocket generation and ranking via Isolation Forest☆13Updated 2 years ago
- few-shot compound activity regression☆13Updated last year
- ☆33Updated last year
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Updated 2 years ago
- A Python framework for the rapid modeling of glycans☆18Updated 2 months ago
- ☆29Updated 2 months ago
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆26Updated 6 months ago
- Implementation for SuperWater☆35Updated last month
- Knowledge-Guided Diffusion Model for 3D Ligand-Pharmacophore Mapping☆45Updated 6 months ago
- Quantitative Estimate Index for Early-Stage Screening of Compounds Targeting Protein-Protein Interactions☆18Updated 2 years ago
- Repo of AntiBMPNN project for antibody sequence design.☆21Updated 6 months ago
- De novo drug design with deep interactome learning☆19Updated 6 months ago
- De novo design of small molecule binding sites into proteins☆12Updated 4 years ago
- Making Protein folding accessible to all!☆25Updated last year