PoGo is a proteogenomic tool which allows mapping of peptides identified through mass spectrometry to a reference genome through provided gene annotation.
☆12Jul 8, 2021Updated 5 years ago
Alternatives and similar repositories for PoGo
Users that are interested in PoGo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PGx supports proteogenomic intregration of mass spectrometry (MS) proteomics data with next generation sequencing (NGS) by mapping identi…☆10Jul 9, 2024Updated 2 years ago
- python scripts for proteogenomics analysis☆10Oct 17, 2019Updated 6 years ago
- Modular and user-friendly platform for AI-assisted rescoring of peptide identifications☆67Aug 1, 2026Updated 3 weeks ago
- An R package to produce full spectrum flow cytometry plots outside the acquisition software.☆11May 9, 2023Updated 3 years ago
- PepQuery: a targeted peptide search engine☆16May 1, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆50Jul 13, 2026Updated last month
- DART-ID: retention time alignment and peptide identification confidence updates☆18Mar 17, 2025Updated last year
- A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant☆47Aug 23, 2026Updated last week
- Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling☆32Oct 15, 2024Updated last year
- A home internet server configuration for the BeagleBone Black, Raspberry Pi or Cubieboard☆10Jun 16, 2014Updated 12 years ago
- DEqMS is a tool for quantitative proteomic analysis☆29Apr 16, 2025Updated last year
- Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics☆11Jun 3, 2025Updated last year
- ☆14Feb 11, 2020Updated 6 years ago
- An easy-to-use and interactive web application for FragPipe☆15Mar 8, 2026Updated 5 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- SaffronTree: Reference free rapid phylogenetic tree construction from raw read data☆25Jun 11, 2020Updated 6 years ago
- Quantitation and visualization of differential alternative splicing events☆11May 2, 2023Updated 3 years ago
- ☆23Jul 29, 2026Updated last month
- R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …☆31Jul 21, 2026Updated last month
- mesa package for Methylation Enrichment Sequencing Analysis☆16Jul 28, 2026Updated last month
- Visual Molecular Dynamics in Docker Container☆12Jan 1, 2015Updated 11 years ago
- De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments☆128Jul 31, 2026Updated 3 weeks ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆31Jul 16, 2026Updated last month
- Fast implementation of the neighbour-joining phylogenetic inference method☆23May 23, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆45Feb 23, 2024Updated 2 years ago
- MS-cleavable search engine that enables interactomic analysis by identifying tandem mass spectra of cross-linked peptides.☆26May 23, 2026Updated 3 months ago
- R scripts to help with your flow cytometry analysis☆28Jun 17, 2022Updated 4 years ago
- Detecting Aberrant Splicing Events from RNA-sequencing data☆17Dec 10, 2024Updated last year
- The files and presentation from the Cytometry Core Facility flow cytometry data analysis course in R☆25Sep 6, 2019Updated 6 years ago
- LipidCreator is a powerful stand alone kick-off tool for targeted lipidomics and a plugin for Skyline. It provides convenient tools to ge…☆11Jun 18, 2026Updated 2 months ago
- k-mer based Pipeline to identify the Serotype from Illumina NGS reads☆27Jul 13, 2023Updated 3 years ago
- Protocol of the analysis of iTRAQ/TMT proteomics data including quantification, statistical analysis and maybe clustering☆12May 4, 2019Updated 7 years ago
- Predict MLST directly from uncorrected long reads☆27Oct 31, 2025Updated 9 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- We assembled a compendium dataset of mass-spectrometry-based proteomics data of 2002 primary tumors from 14 cancer types and 17 studies☆18Feb 4, 2022Updated 4 years ago
- Assembling the cause of phenotypes and genotypes from NGS data☆29Jun 11, 2020Updated 6 years ago
- A CLI for pairwise alignment of sequences, using both normal and mass based alignment.☆17Aug 19, 2026Updated last week
- Mapping Alternative Splicing Events to pRoteins☆21Feb 8, 2022Updated 4 years ago
- Materials and presentation for the 2022 ISB Microbiome course.☆27Jun 13, 2024Updated 2 years ago
- Come build a modern web app showing a heatmap of your Canvas discussions!☆17Mar 3, 2023Updated 3 years ago
- ⏰ Fetch and clean data on a schedule, using GitHub Actions + R☆10Aug 30, 2022Updated 4 years ago