Alternatives and similar repositories for metabolomics2018

Users that are interested in metabolomics2018 are comparing it to the libraries listed below

• RASpicer / MetabolomicsTools
  ☆55Updated 4 years ago
• LiChenPU / NetID
  A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery
  ☆51Updated 2 years ago
• metabolomics-cloud / mummichog
  pathway and network analysis for metabolomics
  ☆43Updated last month
• rformassspectrometry / metaRbolomics-book
  The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.
  ☆35Updated 4 years ago
• fgcz / prolfqua
  Differential Expression Analysis tool box R lang package for omics data
  ☆47Updated last month
• xia-lab / OptiLCMS
  R package for optimized LC-MS spectra processing
  ☆26Updated 3 weeks ago
• shuzhao-li-lab / espol-workshop
  5-day workshop on Metabolomics and Data Analysis
  ☆18Updated 6 years ago
• cpanse / protViz
  Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics
  ☆11Updated 7 months ago
• Vitek-Lab / MSstatsTMT
  R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …
  ☆29Updated 5 months ago
• ZhuMSLab / DecoMetDIA
  ☆12Updated 3 years ago
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆12Updated 4 years ago
• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆20Updated last year
• kentsislab / UltraQuant
  MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters
  ☆27Updated 7 years ago
• jessegmeyerlab / proteomics-tutorial
  ☆67Updated last year
• IFIproteomics / LFQbench
  ☆24Updated 2 years ago
• jaspershen / MetNormalizer
  MetNormalizer is used to normalize large scale metabolomics data.
  ☆22Updated 4 years ago
• Proteomicslab57357 / UniprotR
  Retrieving Information of Proteins from Uniprot
  ☆72Updated last year
• pwilmart / PAW_pipeline
  A Comet-based, best practices proteomics pipeline.
  ☆39Updated last year
• SlavovLab / DO-MS
  An modular and extensible app for visualization of mass spectrometry data and optimization of data acquisition.
  ☆27Updated 10 months ago
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆30Updated last year
• nf-core / metaboigniter
  Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.
  ☆24Updated 7 months ago
• fgcz / rawrr
  Access Orbitrap data in R lang using C# .NET assembly - bioconductor package
  ☆58Updated 4 months ago
• PayneLab / ProteomicsEducation
  ☆38Updated 5 months ago
• statOmics / MSqRob
  Robust statistical inference for quantitative LC-MS proteomics
  ☆33Updated 3 years ago
• xia-lab / MetaboAnalyst_Docker
  Docker for MetaboAnalyst 4.0
  ☆24Updated 5 years ago
• biocore / q2-qemistree
  Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".
  ☆30Updated 2 years ago
• sneumann / mzR
  This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data…
  ☆46Updated last month
• Vitek-Lab / MSstats
  R package - MSstats
  ☆89Updated this week
• dosorio / Peptides
  An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
  ☆96Updated last year
• rickhelmus / patRoon
  Workflow solutions for mass-spectrometry based non-target analysis.
  ☆69Updated this week