conda-incubator / conda-env-builderLinks
Build and maintain multiple custom conda environments all in one place.
☆39Updated 8 months ago
Alternatives and similar repositories for conda-env-builder
Users that are interested in conda-env-builder are comparing it to the libraries listed below
Sorting:
- Converts 'MultiQC' Reports into Tidy Data Frames☆20Updated last year
- Cookiecutter profile for making a NextFlow-based bioinformatics tool☆16Updated last year
- DEvis: an R package for aggregation and visualization of differential expression data☆20Updated 4 years ago
- Intro to workflows for efficient automated data analysis, using snakemake.☆32Updated 6 years ago
- Terraform template to create AWS resources to execute jobs using nextflow☆22Updated 2 years ago
- simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.☆44Updated 2 years ago
- Lightweight Python interfaces for reading, writing, and querying Genomic Regions (BED)☆14Updated 2 months ago
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆45Updated 2 months ago
- Rapid and robust analysis of RNA-Seq experiments.☆32Updated 9 years ago
- Nextflow language support for Visual Studio Editor☆34Updated this week
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆33Updated 2 months ago
- The command-line interface to GGD☆43Updated 2 years ago
- UMCU Genetics Nextflow modules☆28Updated 10 months ago
- a minimal, scriptable genome browser for python☆51Updated 8 months ago
- Demonstrating best practices for bioinformatics command line tools☆26Updated 5 years ago
- A Github action for running a Snakemake workflow☆59Updated 2 months ago
- seqcover allows users to view coverage for hundreds of genes and dozens of samples☆52Updated 4 years ago
- Samwell: a python package for using genomic files... well☆20Updated 3 years ago
- Fast sequencing data quality metrics☆27Updated 2 months ago
- Pipeline to produce consensus reads using unique molecular indexes/barcodes (UMIs)☆24Updated 2 weeks ago
- deploy a snakemake pipeline directly from version control (under development)☆24Updated last month
- A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust☆32Updated 7 months ago
- RNA-seq data comprehensive data analysis toolbox☆19Updated 2 years ago
- Build an index for your BAM Index (BAI)☆17Updated 10 years ago
- interactive plots for differential expression analysis☆34Updated 2 months ago
- Linter rules for Nextflow DSL scripts☆34Updated last month
- R package to quickly obtain count vectors from indexed bam files☆15Updated 2 months ago
- Color DNA/RNA bases in terminal output☆21Updated 7 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- GitHub Action to launch a workflow using Nextflow Tower.☆12Updated 2 years ago