inutano / cwl-metricsLinks
Accumulating container resource usage with workflow metadata
☆19Updated 4 years ago
Alternatives and similar repositories for cwl-metrics
Users that are interested in cwl-metrics are comparing it to the libraries listed below
Sorting:
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 6 years ago
- Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)☆14Updated 4 years ago
- Automated CWL and Galaxy XML generation for Python tools that use argparse and click☆11Updated 6 years ago
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 3 years ago
- An open-source, cloud-ready web application for simplified deployment of big data workflows.☆33Updated 2 months ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆24Updated this week
- Butler is a framework for running scientific workflows on public and academic clouds.☆69Updated 5 years ago
- The WES API is a standard way to run and manage portable workflows.☆85Updated this week
- X things you should take into consideration if you code for big data analysis☆23Updated 7 years ago
- APIs for discovering genomics tools, their metadata and their containers☆31Updated this week
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows☆36Updated this week
- Parallel Recipes : parallel workflow execution made easy☆13Updated 9 years ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆43Updated last year
- EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.☆75Updated last month
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆20Updated 2 years ago
- Docker images of bioinformatics software☆21Updated 8 years ago
- ☆88Updated 2 months ago
- BioContainers specifications☆52Updated 2 years ago
- Mulled - Automatized Containerized Software Repository☆66Updated last year
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- Common Workflow Language definition files for workflows introduced in DAT2☆11Updated 3 years ago
- An app store for scientific workflows, tools, notebooks, and services☆127Updated this week
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Updated 9 months ago
- Request for comments on interchangeable bioinformatics containers☆40Updated 6 years ago
- Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training m…☆96Updated 3 weeks ago
- A translator from WDL to CWL v1.2☆27Updated this week
- Server wrapper that turns command line tools into web services☆61Updated 6 years ago
- Workflow Description Language - Specification and Implementations☆26Updated 6 years ago
- Convert CWL to WDL☆17Updated 8 years ago
- non-redundant, compressed, journalled, file-based storage for biological sequences☆42Updated this week