Accumulating container resource usage with workflow metadata
☆19Mar 17, 2021Updated 5 years ago
Alternatives and similar repositories for cwl-metrics
Users that are interested in cwl-metrics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.☆17May 5, 2026Updated 6 months ago
- Data Profiling and Basic Quality Assessment tool, for the very beginning phase of your project.☆24May 27, 2024Updated 2 years ago
- Command line tool to run batch jobs concurrently with ETL framework on AWS or other cloud computing resources☆30Nov 14, 2018Updated 7 years ago
- Workflows written in common workflow language (CWL)☆14Dec 15, 2018Updated 7 years ago
- Yet Another CWL Engine by Golang☆18Mar 19, 2019Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆24Nov 7, 2022Updated 4 years ago
- The minimum and most straightforward way to check if command exists and where the executable is, without spawning child_process.☆63Feb 14, 2026Updated 8 months ago
- Create Animated GIF from PNGs, JPEGs and, of course, GIFs☆13May 1, 2021Updated 5 years ago
- Released CWL v1.2.1 specification☆45Updated this week
- Automated CWL and Galaxy XML generation for Python tools that use argparse and click☆11Jul 29, 2019Updated 7 years ago
- Graph Splitting Method☆13May 28, 2026Updated 5 months ago
- Python utilities for CWL☆43Updated this week
- The Gen3 Workflow Execution Service☆10Mar 11, 2022Updated 4 years ago
- Reference-free duplex sequencing pipeline.☆19Oct 20, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆25Updated this week
- ☆33Updated this week
- ☆14Dec 7, 2022Updated 3 years ago
- structure detection program☆18Nov 20, 2024Updated last year
- A computational tool for processing and differentiating PCR duplicates from biological duplicates☆10Sep 20, 2018Updated 8 years ago
- An Ansible playbook to automatize the deployment of a Biostar-based project using Docker containers☆10Nov 21, 2014Updated 11 years ago
- A language server for Common Workflow Language☆65Dec 6, 2023Updated 2 years ago
- Typescript data model for Common Workflow Language☆52Mar 3, 2023Updated 3 years ago
- Literate Computing for Reproducible Infrastructure - Hadoop Practice☆11Mar 5, 2026Updated 8 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Visual and code editor for Common Workflow Language☆314Jan 11, 2023Updated 3 years ago
- Generic SDK and CLI for GA4GH API services☆15Updated this week
- Falcon2Fastg is a tool for converting a FALCON assembly to FASTG format to visualize with Bandage☆13May 16, 2016Updated 10 years ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆45Sep 17, 2023Updated 3 years ago
- Jupyter wrapper kernel that logs all cell outputs to files with history tracking☆10Aug 5, 2026Updated 3 months ago
- An Expectation-Maximization algorithm to infer mutational signatures☆27Nov 16, 2016Updated 9 years ago
- High-level API for storing and querying sequence variant data☆19May 24, 2019Updated 7 years ago
- Published at Bioinformatics☆12Jul 4, 2024Updated 2 years ago
- Common Workflow Language tools and workflows by Pitagora-Network☆32Nov 8, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- The WES API is a standard way to run and manage portable workflows.☆93Jun 11, 2026Updated 4 months ago
- Create cwl workflows by writing a simple Python script☆39Apr 29, 2020Updated 6 years ago
- paplot creates various dynamic and interactive reports for cancer genome analysis.☆26Feb 1, 2023Updated 3 years ago
- Common Workflow Language reference implementation☆375Updated this week
- a place for topmed workflows☆12Feb 3, 2022Updated 4 years ago
- A library for generating an interactive SVG visualization of CWL workflows☆78Aug 15, 2024Updated 2 years ago
- Visualise interstrain recombination from environmental samples.☆28Apr 18, 2019Updated 7 years ago