cmzmasek / archaeopteryx-jsLinks
Archaeopteryx.js is a software tool for the visualization and analysis of highly annotated phylogenetic trees.
☆41Updated 2 weeks ago
Alternatives and similar repositories for archaeopteryx-js
Users that are interested in archaeopteryx-js are comparing it to the libraries listed below
Sorting:
- Interactive, web-based BLAST results visualization tool. Accessible at https://kablammo.wasmuthlab.org.☆68Updated 2 years ago
- an interactive viewer for populations of bacterial genomes linked by a phylogeny☆125Updated last year
- Sample search by metadata and features☆47Updated last year
- An imagemagick-like frontend to Biopython SeqIO☆115Updated last year
- de novo virus assembler of Illumina paired reads☆56Updated 4 years ago
- SEER, reimplemented in python 🐍🔮☆122Updated last month
- Kmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, et…☆91Updated 2 months ago
- The Biological Observation Matrix (BIOM) Format Project☆94Updated last week
- Calculate summary statistics and manipulate multiple sequence alignments☆85Updated last year
- Protein Alignment and Detection Interface☆61Updated last year
- In this repo you will find demos and tutorials prepared by members of the CBIB. Feel free to use them for non-commercial activities given…☆82Updated 7 years ago
- MEGAN Community Edition☆72Updated last year
- viral-ngs: complete pipelines☆64Updated this week
- Antibiotic resistance prediction in minutes☆109Updated 7 months ago
- Interactive visualization of assembly graphs☆82Updated 3 years ago
- Bioinformatics Pipeline and Visualization resources☆56Updated 10 months ago
- Phylogenetic tree viewer based on D3.js☆56Updated 11 months ago
- Highly customizable, ambiguity-aware dotplots for visual sequence analyses☆91Updated last month
- Indexing & querying large assembly graphs -- in space, no one can hear you miao!☆117Updated last year
- Visualization of the pan-genome output by panX☆63Updated last month
- Catalog of genomic indexes freely available from public clouds☆61Updated this week
- just annotate it, dammit!☆93Updated last year
- ☆131Updated 10 months ago
- baltic - backronymed adaptable lightweight tree import code for molecular phylogeny manipulation, analysis and visualisation. Development…☆107Updated 2 weeks ago
- A simple command-line tool to download data from Joint Genome Institute databases☆52Updated 2 years ago
- A snakemake-based pipeline for assembling and polishing long genomes from long nanopore reads☆69Updated 3 years ago
- Processing pipeline for pan-genome visulization and exploration☆140Updated last year
- GET_HOMOLOGUES: a versatile software package for pan-genome analysis☆116Updated 3 weeks ago
- De novo genome assembly and multisample variant calling☆112Updated 6 years ago
- Mining CRISPRs in Environmental Datasets☆107Updated 2 years ago