Alternatives and similar repositories for archaeopteryx-js

Users that are interested in archaeopteryx-js are comparing it to the libraries listed below

• neherlab / pan-genome-visualization
  Visualization of the pan-genome output by panX
  ☆63Updated last month
• broadinstitute / viral-pipelines
  viral-ngs: complete pipelines
  ☆65Updated 2 weeks ago
• refresh-bio / kmer-db
  Kmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, et…
  ☆92Updated 2 months ago
• ToniWestbrook / paladin
  Protein Alignment and Detection Interface
  ☆61Updated last year
• biocore / redbiom
  Sample search by metadata and features
  ☆47Updated last year
• husonlab / megan-ce
  MEGAN Community Edition
  ☆73Updated last year
• jameshadfield / phandango
  an interactive viewer for populations of bacterial genomes linked by a phylogeny
  ☆126Updated last year
• jwintersinger / kablammo
  Interactive, web-based BLAST results visualization tool. Accessible at https://kablammo.wasmuthlab.org.
  ☆68Updated 2 years ago
• chanzuckerberg / czid-workflows
  Portable WDL workflows for CZ ID production pipelines
  ☆46Updated last month
• microgenomics / tutorials
  In this repo you will find demos and tutorials prepared by members of the CBIB. Feel free to use them for non-commercial activities given…
  ☆82Updated 7 years ago
• Mykrobe-tools / mykrobe
  Antibiotic resistance prediction in minutes
  ☆110Updated 8 months ago
• arpcard / amr_curation
  A public repository for collective curation of antimicrobial resistance (AMR) genes and mutations. Submit, discuss, and resolve AMR curat…
  ☆59Updated 8 months ago
• kjolley / BIGSdb
  Bacterial Isolate Genome Sequence Database (BIGSdb): A platform for gene-by-gene bacterial population annotation and analysis.
  ☆70Updated 3 weeks ago
• steineggerlab / conterminator
  Detection of incorrectly labeled sequences across kingdoms
  ☆85Updated 2 years ago
• spacegraphcats / spacegraphcats
  Indexing & querying large assembly graphs -- in space, no one can hear you miao!
  ☆118Updated last year
• biocore / biom-format
  The Biological Observation Matrix (BIOM) Format Project
  ☆94Updated last month
• happykhan / BRIG
  BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…
  ☆35Updated 6 years ago
• KatyBrown / CIAlign
  ☆131Updated 11 months ago
• lh3 / jstreeview
  Interactive phylogenetic tree viewer/editor
  ☆47Updated 2 years ago
• infspiredBAT / Circoletto
  visualising sequence similarity with Circos
  ☆41Updated 6 years ago
• almiheenko / AGB
  Interactive visualization of assembly graphs
  ☆82Updated 3 years ago
• qiyunzhu / woltka
  Woltka: a versatile meta'omic data classifier
  ☆75Updated 4 months ago
• snayfach / MIDAS
  An integrated pipeline for estimating strain-level genomic variation from metagenomic data
  ☆128Updated last year
• nathanweeks / exonerate
  A fork of exonerate: a generic tool for sequence alignment
  ☆69Updated last year
• hzi-bifo / traitar
  From genomes to phenotypes: Traitar, the microbial trait analyzer
  ☆59Updated 6 years ago
• nf-core / bacass
  Simple bacterial assembly and annotation pipeline
  ☆75Updated 2 weeks ago
• sanger-pathogens / iva
  de novo virus assembler of Illumina paired reads
  ☆56Updated 4 years ago
• widdowquinn / find_differential_primers
  Code for design of diagnostic PCR primers, and metabarcoding markers.
  ☆62Updated last year
• flexidot-bio / flexidot
  Highly customizable, ambiguity-aware dotplots for visual sequence analyses
  ☆92Updated 2 months ago
• genotoul-bioinfo / dgenies
  Dotplot large Genomes in an Interactive, Efficient and Simple way
  ☆107Updated this week