Archaeopteryx.js is a software tool for the visualization and analysis of highly annotated phylogenetic trees.
☆41Feb 24, 2026Updated last month
Alternatives and similar repositories for archaeopteryx-js
Users that are interested in archaeopteryx-js are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆22May 24, 2016Updated 9 years ago
- forester is a collection of open source libraries of Java and Ruby software for phylogenomics and evolutionary biology research☆37Apr 1, 2026Updated 2 weeks ago
- Multiple sequence alignment browser☆11Dec 12, 2022Updated 3 years ago
- JBrowse plugin that supports smallRNA alignments☆12Apr 8, 2019Updated 7 years ago
- Flexible omics pipeline☆17Oct 16, 2025Updated 6 months ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆17Feb 22, 2022Updated 4 years ago
- Viral (meta)-genome assembly pipeline.☆23Apr 3, 2026Updated 2 weeks ago
- ☆16May 12, 2023Updated 2 years ago
- Suite of command-line software for high-performance graphical analysis of ChIP-seq/RNA-seq/ATAC-seq data☆21May 2, 2022Updated 3 years ago
- JBrowse plugin for methylation related things☆16Oct 9, 2018Updated 7 years ago
- Genome Contact Map Explorer - gcMapExplorer. Visit:☆21Jan 23, 2022Updated 4 years ago
- A package for creating and managing sample identifiers in comparative -omics datasets.☆23Jan 30, 2017Updated 9 years ago
- 📊 Unipept visualisations, packaged for easy reusability☆20Feb 25, 2026Updated last month
- Interactive phylogenetic tree viewer/editor☆49Jul 12, 2023Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Script that labels phylogenetic clades based on the clade of the nearest neighbor using patristic distances determined from the tree.☆15Dec 11, 2024Updated last year
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Apr 10, 2023Updated 3 years ago
- Scripts and files for the annual Short Read Analysis Workshop☆12Apr 2, 2026Updated 2 weeks ago
- A collection of “cookbook-style” scripts for simplifying data engineering and machine learning in Apache Spark.☆13Oct 27, 2021Updated 4 years ago
- Visualize and perform a multitude of operations on newick files☆17Mar 7, 2022Updated 4 years ago
- Phylogenetic tree library for JavaScript/Node.js☆39Nov 16, 2022Updated 3 years ago
- Sparse Cooccurence Network Investigation for Compositional data☆25Feb 1, 2026Updated 2 months ago
- A surveillance-oriented tool to strengthen the linkage between pathogen genetic clusters and epidemiological data☆48Feb 20, 2026Updated last month
- ☆10Dec 20, 2022Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A web application that keeps track of real-time spread of COVID19 in India as well as across the world.☆13Jun 3, 2022Updated 3 years ago
- A tool for performing collinearity-incorporating homology inference☆33Oct 7, 2023Updated 2 years ago
- Snakemake template for building reusable and scalable machine learning pipelines with mikropml☆13Feb 26, 2025Updated last year
- Course materials for an introduction to SARS-CoV-2 sequencing data analysis☆14Aug 15, 2024Updated last year
- Dendroscope program for analyzing and visualizing rooted phylogenetic trees and networks☆48Apr 28, 2025Updated 11 months ago
- Phylogenetic tree viewer based on D3.js☆61Aug 16, 2024Updated last year
- Benchmarking of long-read assembly tools for bacterial whole genomes☆171Mar 15, 2021Updated 5 years ago
- A book for my course☆23Mar 17, 2026Updated last month
- Parser for Ghost Koala☆10Aug 23, 2018Updated 7 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Python tool to reduce size and redundancy of phylogenetic datasets☆51Dec 5, 2025Updated 4 months ago
- R interface to the JBrowse 2 Linear Genome View.☆39Mar 12, 2024Updated 2 years ago
- Find the posterior decoding of a long sequence of observations.☆17Jul 29, 2010Updated 15 years ago
- ☆12Feb 26, 2024Updated 2 years ago
- BEAST 2 package which provides support for multi-type trees: phylogenetic trees on structured populations.☆21Aug 11, 2025Updated 8 months ago
- Rapid & standardized genome annotation using protein structural information☆60Apr 8, 2026Updated last week
- This is the raw data and code repository of the SARS-ANI project on SARS-CoV-2 events in animals.☆16Jun 3, 2025Updated 10 months ago