amel-github / sars-aniLinks
This is the raw data and code repository of the SARS-ANI project on SARS-CoV-2 events in animals.
☆16Updated 3 months ago
Alternatives and similar repositories for sars-ani
Users that are interested in sars-ani are comparing it to the libraries listed below
Sorting:
- ☆54Updated 3 years ago
- examples of using slurm in life sciences workflows using posix file systems and object storage☆41Updated last year
- Java software to analyse phylogeny-trait correlations in discrete traits, accounting for phylogenetic uncertainty via posterior sampling.☆12Updated 7 years ago
- During outbreaks of emerging diseases such as COVID-19, efficiently collecting, sharing, and integrating data is critical to scientific r…☆33Updated this week
- Data and scripts for Zika virus tutorial☆10Updated 9 months ago
- Racmacs R package for performing antigenic cartography☆23Updated last year
- Real time and remote MCMC trace monitoring with BEASTIARY.☆20Updated 3 months ago
- phylogenetic analyses informed by deep mutational scanning data☆15Updated last year
- Tutorials for data science and bioinformatics☆12Updated last year
- Conditional Auto-Regressive LASSO in R☆20Updated 2 years ago
- Inferring spatiotemporal dynamics of H5N1 influenza from sequence data☆10Updated 11 years ago
- shell toolkit for deploying script/command task on remote host, including up/download files, run script on remote☆21Updated 4 years ago
- The R package manager that is blazingly fast ⚡. Powered by mamba.☆76Updated 2 years ago
- Aim to be the bioinformatics repository with more and newer packages https://doi.org/10.1093/bioinformatics/btaf106☆95Updated this week
- Import script needed to build FluPRINT database from source☆11Updated 6 years ago
- A web platform to detect and analyze variants of SARS-CoV-2☆60Updated last week
- babette is an R package to work with BEAST2☆46Updated 2 weeks ago
- 🧬 Efficient parallelized peta-scale protein database search☆41Updated last year
- An R package with toolkits for tong's friends☆11Updated 5 months ago
- Tutorial on Bayesian phylogenetic analysis☆47Updated 7 years ago
- Create, modify and analyse phylogenetic trees in R☆23Updated this week
- Script that labels phylogenetic clades based on the clade of the nearest neighbor using patristic distances determined from the tree.☆11Updated 8 months ago
- Online workflow guidelines for metabolomics☆23Updated 7 months ago
- Graph Clustering Merger☆37Updated last year
- Computes affinity between two entities based on their co-occurrence☆27Updated 2 months ago
- BEAST 2 package which provides support for multi-type trees: phylogenetic trees on structured populations.☆21Updated 3 weeks ago
- Resources for Influenza Research☆23Updated 3 years ago
- A Python library for creating publication-ready plots with a fluent, chainable interface. Built on top of plotnine, it provides a pandas …☆22Updated 4 months ago
- Welcome to the StrainHub Repo - Files and Data - StrainHub Online:☆17Updated 3 years ago
- Analysis of EBOV genome sequence from Guinea, Sierra Leone and Liberia from 2014-2016☆59Updated 6 years ago