Interactive phylogenetic tree viewer/editor
☆49Jul 12, 2023Updated 3 years ago
Alternatives and similar repositories for jstreeview
Users that are interested in jstreeview are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆32Dec 16, 2022Updated 3 years ago
- String algorithm visualizations☆14Feb 7, 2023Updated 3 years ago
- Sketch phylogenetic trees and networks☆26Aug 27, 2026Updated last week
- The `awk` script to calculate population stats in VCF files: convenient, simple, flexible☆32Aug 18, 2026Updated 2 weeks ago
- PAF (pairwise alignment format) validator based on extended CIGAR strings☆15Aug 10, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Wavefront alignment algorithm (WFA) in Golang☆32Aug 21, 2026Updated 2 weeks ago
- ☆20Jan 13, 2026Updated 7 months ago
- ☆23Aug 28, 2026Updated last week
- ☆45Dec 29, 2025Updated 8 months ago
- BItsliced Genomic Signature Index - Efficient indexing and search in very large collections of WGS data☆10Jun 13, 2023Updated 3 years ago
- A web-based, interactive pangenome visualization tool☆21Apr 10, 2023Updated 3 years ago
- Constructing a pangenome gene graph☆212Aug 11, 2025Updated last year
- adaptive genome assembly using nanopore sequencing☆27Aug 25, 2026Updated last week
- Uncompromisingly Flexible Phylogenetic Trees in Javascript☆23Apr 8, 2026Updated 4 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆41Apr 9, 2026Updated 4 months ago
- Simple pileup-based variant caller☆95Apr 25, 2025Updated last year
- Scoring GT/AG sites for improving spliced alignment☆58Nov 10, 2025Updated 9 months ago
- De novo chromosome-level scaffolding and phasing tool using Hi-C☆30Nov 23, 2025Updated 9 months ago
- Fast, Cache-Efficient, and Scalable Queries on Pangenomes☆46Mar 9, 2026Updated 5 months ago
- Align proteins to genomes with splicing and frameshift☆417Jan 5, 2026Updated 8 months ago
- Alignment-free pangenome browser and analysis toolkit☆85May 18, 2026Updated 3 months ago
- A "Navie" Implementation of the Wavefront Algorithm For Sequence Alignment with Gap-Affine Scoring☆14May 29, 2026Updated 3 months ago
- base-accurate DNA sequence alignments using WFA and mashmap3☆223Aug 27, 2026Updated last week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆63Jul 5, 2026Updated 2 months ago
- ☆165Apr 13, 2026Updated 4 months ago
- the pangenome graph builder☆514Jul 24, 2026Updated last month
- Interactive multiscale visualization for structural variation in human genomes☆73Jul 21, 2026Updated last month
- Dividing heterogeneous long-read sequencing into groups with de Bruijn graphs☆48Aug 5, 2026Updated last month
- pangenome alignment, implicit/explicit graph, and variants for human pangenome project release 2☆24Jul 1, 2026Updated 2 months ago
- Expedite large-scale identification of CNVs within predefined genomic regions. Online app available for those with GP2 Tier 2 Access.☆14Mar 16, 2026Updated 5 months ago
- ANI based satellite annotation☆29Aug 6, 2026Updated last month
- a tool for inferring species tree from sequencing reads☆161May 19, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- bioinformatics toolkit in rust☆107Aug 16, 2026Updated 3 weeks ago
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆131Aug 24, 2026Updated last week
- ☆29Oct 11, 2025Updated 10 months ago
- Interactive visual analytic tool for exploring epigenomics data w/ associated metadata, powered by HiGlass and Gosling☆13Nov 10, 2023Updated 2 years ago
- Classify sequencing reads using MinHash.☆48Apr 6, 2020Updated 6 years ago
- SRF: Satellite Repeat Finder☆108Jan 8, 2024Updated 2 years ago
- Genomic Visualization Catalog☆13Oct 6, 2022Updated 3 years ago