Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis Consortium (CPTAC)
☆39Aug 5, 2026Updated this week
Alternatives and similar repositories for PANOPLY
Users that are interested in PANOPLY are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Jul 6, 2023Updated 3 years ago
- A tool integrates channel abundances from multiple TMT samples and exports a general report for downstream analysis.☆14Jun 25, 2026Updated last month
- Imputing proteomics data using deep learning models☆35Jul 8, 2026Updated last month
- We aim to make it easier for biomedical researchers to access and customize synthetic sequence data for the purpose of sharing and testin…☆11Jul 22, 2019Updated 7 years ago
- An R package of High-resolution Informatics Toolbox for Maldi-imaging Proteomics☆19Jul 19, 2026Updated 3 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Imputation of missing values of a matrix or data.frame using iterative prediction model☆37Mar 5, 2026Updated 5 months ago
- Python Client Library for the G2P Portal API☆15May 20, 2026Updated 2 months ago
- Initial recommendations for performing, benchmarking, and reporting single-cell proteomics experiments. The code is distributed under an …☆12Apr 5, 2023Updated 3 years ago
- ☆10Oct 18, 2021Updated 4 years ago
- Python tools for proteogenomics analysis toolkit☆17May 23, 2026Updated 2 months ago
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆128Jul 18, 2026Updated 3 weeks ago
- ☆16Jul 2, 2026Updated last month
- 🧪 🖥 Transparent exploration of machine learning for biomarker discovery from proteomics and omics data☆38Jun 10, 2024Updated 2 years ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆49Jul 13, 2026Updated 3 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Toolkits for NCBI Pubmed☆30Nov 22, 2024Updated last year
- A tool for large scale omics datasets evaluation☆24Jun 14, 2023Updated 3 years ago
- Gene expression viewer template☆12Aug 30, 2017Updated 8 years ago
- Single cell proteomics data processing☆33Jul 23, 2026Updated 2 weeks ago
- MS File ToolBox - tools for parsing some mass-spectrometry related file formats (mzML, mzXML, pep.xml, prot.xml, etc.)☆13Aug 26, 2022Updated 3 years ago
- A list of tools on proteomics using deep learning☆108May 14, 2026Updated 2 months ago
- Proteomics Toolset for Integrative Data Analysis☆27Oct 7, 2025Updated 10 months ago
- ☆15Aug 22, 2023Updated 2 years ago
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Mar 26, 2026Updated 4 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- The Kinase Library: a Global Atlas of the Human Protein Kinome☆23May 1, 2026Updated 3 months ago
- ☆12Jan 14, 2023Updated 3 years ago
- Repository for mzIdentML and the corresponding examples☆27May 6, 2026Updated 3 months ago
- ☆26Updated this week
- Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)☆15Jan 27, 2023Updated 3 years ago
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆25Apr 8, 2026Updated 4 months ago
- Facilitating the use of Deep Visual Proteomics☆17Jan 16, 2026Updated 6 months ago
- mzTab Reporting MS-based Proteomics and Metabolomics Results☆47Jun 12, 2026Updated last month
- An R package for correcting p-values for multiple hypothesis testing in comparative quantitative omics experiments using permutation-base…☆13Mar 11, 2026Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Python package for virtual screening of generated molecules using autodock-vina and tensorflow☆14Mar 22, 2021Updated 5 years ago
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆71Jan 6, 2026Updated 7 months ago
- ☆15Apr 26, 2022Updated 4 years ago
- A highly interactive single-cell bioinformatics workflow management library. Built with dataforest☆10Oct 4, 2022Updated 3 years ago
- ☆56Nov 28, 2022Updated 3 years ago
- ☆28Sep 20, 2023Updated 2 years ago
- ☆16May 27, 2026Updated 2 months ago