broadinstitute / PANOPLYLinks
Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis Consortium (CPTAC)
☆37Updated this week
Alternatives and similar repositories for PANOPLY
Users that are interested in PANOPLY are comparing it to the libraries listed below
Sorting:
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆30Updated 11 months ago
- R package for analysing proteomics data☆50Updated 2 years ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆63Updated last month
- An S3 data object and framework for common quantitative proteomic analyses☆47Updated 5 months ago
- Shiny app for making and annotating Volcano plots☆25Updated last year
- Code related to the Celligner manuscript☆46Updated 5 years ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- An r package for proteomics data Analysis, developed from DEP.☆31Updated 7 months ago
- A tool for large scale omics datasets evaluation☆25Updated 2 years ago
- Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/☆21Updated 2 years ago
- Immunology-related bioinformatics data and tools☆75Updated last year
- ☆41Updated last week
- The repo for LFQ-Analyst☆30Updated last year
- ☆49Updated 3 years ago
- Signac☆25Updated 2 years ago
- DEqMS is a tool for quantitative proteomic analysis☆24Updated 7 months ago
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆56Updated 2 years ago
- Using R and Bioconductor packages for the analysis and comprehension of proteomics data.☆98Updated 2 months ago
- DIABLO - an integrative multi-group, multi-dataset classification method☆26Updated 6 years ago
- R package for the analysis of single-cell immune repertoires☆43Updated 9 months ago
- Repository for the R package EPIC, to Estimate the Proportion of Immune and Cancer cells from bulk gene expression data.☆84Updated 2 years ago
- ☆18Updated 3 years ago
- Differential Expression Analysis tool box R lang package for omics data☆46Updated last week
- Inference of TCR motifs☆32Updated 5 months ago
- ☆67Updated 2 years ago
- Compute generation probabilities of CDR3 amino acid and nucleotide sequences☆62Updated 2 weeks ago
- ChIP-Atlas: Browse and analyze all public ChIP/DNase-seq data on your browser☆79Updated 3 weeks ago
- A toolkit for optimal workflow recommendation for proteomics data differential expression analysis☆18Updated last year
- Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.☆25Updated 5 months ago
- ☆20Updated 3 years ago