Code for RNA-seq gene coexpression analysis
☆10Dec 23, 2021Updated 4 years ago
Alternatives and similar repositories for rnaseq_coexpression
Users that are interested in rnaseq_coexpression are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- a nextflow pipeline for creating a pangenome with minigraph-cactus☆16Sep 13, 2024Updated last year
- MGcount github repository☆14Jan 19, 2023Updated 3 years ago
- Genome Assembly 102☆17Apr 23, 2025Updated 11 months ago
- TWAS-pipeline☆24Feb 21, 2021Updated 5 years ago
- material related to the genetech courses☆10Sep 11, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- CORNAS is a fast method for reliable DEG calls in unreplicated conditions.☆13Jul 14, 2019Updated 6 years ago
- ☆12Jun 11, 2023Updated 2 years ago
- ☆24Mar 4, 2026Updated 3 weeks ago
- This repository consists of scripts and workflows used for generating results, figures, and tables published in the article: Can Liu, And…☆15Feb 17, 2021Updated 5 years ago
- Prefix-renaming FASTA records really fast.☆17Jun 26, 2024Updated last year
- Repository for Discussions and Materials about The Carpentries Workbench☆20Updated this week
- Scripts used to perform analyses in Rice et al. (2023)☆16Dec 28, 2023Updated 2 years ago
- ☆14Apr 26, 2023Updated 2 years ago
- ☆13Feb 12, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Run multiple Pipeline5 instances at once☆11Jun 6, 2025Updated 9 months ago
- ABSOLUTE source code that works with allelic copy ratio on both hg19 and hg38☆13Nov 5, 2025Updated 4 months ago
- Total copy number inference from single-cell RNA and ATAC sequing with cell clustering☆11Oct 31, 2024Updated last year
- My English blog built with Hugo☆11Feb 14, 2026Updated last month
- A graph-based pipeline used to call/genotype snvs/indels/SVs from NGS data☆17Aug 30, 2025Updated 6 months ago
- ☆21Mar 11, 2026Updated 2 weeks ago
- ☆11May 26, 2023Updated 2 years ago
- CircRNA testing and ploting R package☆10Nov 23, 2020Updated 5 years ago
- NeoDisc - A computational pipeline for the identification and prioritization of immunogenic tumor-specific HLA-I and -II antigens from ge…☆14Oct 8, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆20Apr 15, 2024Updated last year
- A library to create lore plots (logistic regression of the prevalence of a categorical variable in function of a continuous feature)☆18Mar 1, 2026Updated 3 weeks ago
- detecting spatial patterns of allele-specific expression☆11May 22, 2024Updated last year
- Tumour Heterogeneity and Intercellular Networks of Nasopharyngeal Carcinoma at Single Cell Resolution☆13Mar 1, 2023Updated 3 years ago
- Single cell RNA-seq analysis for transcriptomic type characterization☆38Mar 20, 2026Updated last week
- Scripts used for the Differential NicheNet analyses in the Liver Atlas paper Guilliams et al., Cell 2022☆10Jan 12, 2022Updated 4 years ago
- GLASS consortium☆14May 31, 2022Updated 3 years ago
- Workflow Description Language (WDL) scripts for common vg workflows☆23Dec 15, 2025Updated 3 months ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆14Apr 12, 2023Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Principal component analysis plugin for D3.js☆10Aug 20, 2017Updated 8 years ago
- Toolkit for VNTR genotyping and repeat-pan genome graph construction☆32Aug 18, 2025Updated 7 months ago
- Singularity port of HLA typing based on an input exome BAM file and is currently infers infers alleles for the three major MHC class I (…☆14Jan 15, 2017Updated 9 years ago
- ☆12Jan 3, 2017Updated 9 years ago
- mouse pet-ct image segmentation☆12Feb 19, 2023Updated 3 years ago
- An unofficial experimental port of the Google App Engine SDK to Python 3, using Managed VMs☆12Jan 13, 2015Updated 11 years ago
- toolkit to process gtf files☆17Dec 24, 2021Updated 4 years ago