shuxiaoc / mario-pyLinks
MARIO: single-cell proteomic data matching and integration using both shared and distinct features
☆22Updated 2 years ago
Alternatives and similar repositories for mario-py
Users that are interested in mario-py are comparing it to the libraries listed below
Sorting:
- ☆45Updated 3 months ago
- CAST package☆40Updated last year
- ☆56Updated last year
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆40Updated 9 months ago
- ☆50Updated last month
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆38Updated last year
- Spatial direct messaging detected by bivariate Moran☆31Updated 3 months ago
- spatial transcriptome, single cell☆71Updated 2 years ago
- Probabilistic Alignment of Spatial Transcriptomics Experiments v.2☆40Updated 8 months ago
- ☆31Updated 8 months ago
- UniTVelo, Temporally Unified RNA Velocity for single cell trajectory inference☆26Updated last year
- ☆46Updated last year
- Probabilistic Alignment of Spatial Transcriptomics Experiments☆96Updated 8 months ago
- The benchmarking of spatial transcriptomics deconvolution methods☆33Updated 2 years ago
- DIALOGUE is a dimensionality reduction method that uses cross-cell-type associations to identify multicellular programs (MCPs) and map th…☆115Updated last year
- R implementation of GeneTrajectory☆65Updated last year
- Spatial reconstruction of dissociated single-cell data☆19Updated last year
- End-to-end analysis of spatial multi-omics data☆95Updated last week
- CeLEry: cell location recovery in single-cell RNA sequencing☆35Updated 9 months ago
- Awesome list of tools and methods to perform spatial transcriptomic data analysis.☆46Updated 4 years ago
- User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins☆67Updated last week
- astir | Automated cell identity from single-cell multiplexed imaging and proteomics 🖥🔬✨☆57Updated 4 months ago
- ☆26Updated last year
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆33Updated 2 years ago
- Predict RNA velocity through deep learning☆70Updated last year
- ☆27Updated 5 years ago
- ☆33Updated 7 months ago
- Single-Cell Analysis of Inter-Individual Variability by Interpretable Tensor Decomposition☆63Updated last year
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆33Updated 7 months ago
- Non-parametric density inference for single-cell analysis.☆72Updated 5 months ago