Kuanhao-Chao / RNASeqRView external linksLinks
π An R package of RNA-seq workflow
β15May 4, 2022Updated 3 years ago
Alternatives and similar repositories for RNASeqR
Users that are interested in RNASeqR are comparing it to the libraries listed below
Sorting:
- Gapless, reference-quality Southern Han Chinese genome assembly and annotationβ12Oct 24, 2022Updated 3 years ago
- π wheeler graph recognition algorithm, visualization and generationβ21Jul 7, 2023Updated 2 years ago
- πΆπΌπΌ a RPG game modified from a unity 2D game kitβ22Sep 20, 2023Updated 2 years ago
- GLASS consortiumβ14May 31, 2022Updated 3 years ago
- ClusterScan, search for clusters of features in a given annotation.β11Aug 26, 2021Updated 4 years ago
- Blacktie: a streamlined interface to the popular tophat/cufflinks RNA-seq pipelineβ26Oct 5, 2015Updated 10 years ago
- Integrative analysis for scRNA-seq and scTCR-/scBCR-seq dataβ20Updated this week
- Code used for the single-cell RNA-Seq batch effects paperβ10Sep 25, 2017Updated 8 years ago
- β14Sep 16, 2023Updated 2 years ago
- Class materials for the NIH HPC snakemake classβ15Sep 27, 2024Updated last year
- β14Aug 9, 2016Updated 9 years ago
- Analysis of single cell RNA-seq data from innate lympoid cellsβ15Aug 8, 2017Updated 8 years ago
- Rna-seq pipeline, From FASTQ to differential expression analysis...β20Mar 13, 2017Updated 8 years ago
- A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq dataβ16Jun 17, 2020Updated 5 years ago
- A collection of useful functions for bioinformatics data analysisβ24Feb 5, 2026Updated last week
- β18Oct 4, 2022Updated 3 years ago
- An application to compare genetic maps with D3 & Shinyβ22Feb 28, 2023Updated 2 years ago
- Three bacterial GWAS methods all rolled into one easy-to-use R packageβ22Apr 16, 2024Updated last year
- R package providing Variance Stabilizing Transformations appropriate for RNA-Seq dataβ21May 23, 2025Updated 8 months ago
- Make rapid visualizations of RNA-seq data in Rβ20Oct 7, 2025Updated 4 months ago
- RNA-seq workflow for Snakemake based on STAR and featureCounts.β23May 25, 2019Updated 6 years ago
- βοΈ Deep learning-based splice site predictor that improves spliced alignmentsβ59Feb 26, 2025Updated 11 months ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequencesβ24Jan 30, 2026Updated 2 weeks ago
- A Shiny web server for interactive visualization and analysis of RNA-seq dataβ22Mar 24, 2021Updated 4 years ago
- Rapid analysis and visualisation for bulk RNA-seq, psuedo-bulk RNA-seq, GeoMx and Proteomic datasets.β30Sep 17, 2024Updated last year
- RNA-Seq pipelineβ35Jul 22, 2015Updated 10 years ago
- An R package for getting academic projects/papers started.β29May 3, 2023Updated 2 years ago
- Ultra-fast 5' and 3' demultiplexerβ29Apr 23, 2024Updated last year
- Tools to handle reads sequenced with unique molecular identifiers (UMIs).β30Jun 26, 2017Updated 8 years ago
- β10Aug 19, 2024Updated last year
- β29May 20, 2020Updated 5 years ago
- A Python interface for NIH Reporter APIsβ11Feb 4, 2025Updated last year
- R library for visualizing (social science) sequence data using ggplot2β16Nov 16, 2025Updated 3 months ago
- β13Sep 22, 2017Updated 8 years ago
- Template for a computational lab notebook using bookdownβ13Mar 16, 2018Updated 7 years ago
- A unified interface to spatial transcriptomics deconvolution toolsβ45Jan 27, 2026Updated 2 weeks ago
- Combined clonality and transcriptome scRNAseq clustering methodβ11Dec 3, 2022Updated 3 years ago
- Compare 2 basketball players by reading/comparing NBA stats in an Excel sheet.β11Aug 19, 2018Updated 7 years ago
- Intro to R for Datascience workshop contentβ16Mar 24, 2022Updated 3 years ago