daniel-spies / rna-seq_tcComp
Comparison of RNA-seq time course differential expression analysis tools
☆12Updated 7 years ago
Alternatives and similar repositories for rna-seq_tcComp:
Users that are interested in rna-seq_tcComp are comparing it to the libraries listed below
- Clone of the Bioconductor repository for the scRNAseq package.☆25Updated 2 months ago
- Main codes for AD epigenetics paper by Nativio et al.☆11Updated 5 years ago
- Predicted cell-cell interactions of the aging mouse brain☆20Updated 5 years ago
- Statistical power studies for multi-omics experiments.☆31Updated 2 months ago
- Reconstruction of higher order chromatin from scRNA-seq and scATAC-seq☆14Updated last week
- rCASC: reproducible Classification Analysis of Single Cell Sequencing Data☆13Updated 2 weeks ago
- R package for plotting 3D graphical visualization of multi-omics data.☆22Updated 3 years ago
- Processed rna-seq data, copy number variation data, and methylation data on GEO and TCGA☆25Updated last year
- ☆32Updated last year
- Statistical approach for removing unwanted variation from multiple single-cell datasets☆66Updated 11 months ago
- R package for the identification of cancer-associated mutated genes using gene expression and mutation data.☆10Updated 3 years ago
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- An R/Bioconductor package that implements a single-sample molecular phenotyping approach☆41Updated 4 months ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- An R Package for Geneset Enrichment Workflows☆76Updated last week
- A GUI tool for easy and smooth visualisation and analysis of Spatial Transcriptomics datasets☆13Updated 3 years ago
- From IDAT to beta.☆25Updated 6 years ago
- Jupyter notebook repository for reproducing analysis in "DNA Methylation Landscape of the Mouse Brain at Single-Cell Resolution"☆13Updated 4 years ago
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆23Updated 4 years ago
- A method to rapidly assess cell type identity using both functional and random gene sets☆13Updated 5 years ago
- ☆12Updated 4 years ago
- Gene-level general linear mixed model☆20Updated 2 months ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆44Updated last year
- Explore and share your scRNAseq clustering results☆50Updated last year
- Identify and correct invalid gene symbols☆59Updated 4 months ago
- GWAS gold standards repository☆32Updated last year
- Moana: Robust cell type classification of single-cell RNA-Seq data☆24Updated 6 years ago
- Marker Selection by matching manifolds and elastic net☆23Updated 5 months ago
- A R framework for pipeline benchmarking, with application to single-cell RNAseq☆41Updated 3 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated 8 months ago