daniel-spies / rna-seq_tcCompLinks
Comparison of RNA-seq time course differential expression analysis tools
☆13Updated 7 years ago
Alternatives and similar repositories for rna-seq_tcComp
Users that are interested in rna-seq_tcComp are comparing it to the libraries listed below
Sorting:
- From IDAT to beta.☆25Updated 7 years ago
- R package for plotting 3D graphical visualization of multi-omics data.☆23Updated 3 years ago
- Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizing high dimensional datasets☆105Updated 2 years ago
- Reconstruction of higher order chromatin from scRNA-seq and scATAC-seq☆14Updated last week
- A study to compare methods for clustering of scRNA-seq data☆43Updated last year
- Clone of the Bioconductor repository for the scRNAseq package.☆29Updated 8 months ago
- Statistical approach for removing unwanted variation from multiple single-cell datasets☆67Updated last year
- ☆37Updated 2 months ago
- ☆32Updated last year
- netSmooth: A Network smoothing based method for Single Cell RNA-seq imputation☆28Updated last year
- Predicted cell-cell interactions of the aging mouse brain☆20Updated 5 years ago
- ☆12Updated 3 years ago
- Topics In Data Science and Bioinformatics☆79Updated last year
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆23Updated 6 years ago
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆39Updated 3 years ago
- ☆12Updated last year
- A method to rapidly assess cell type identity using both functional and random gene sets☆13Updated 6 years ago
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆13Updated 6 years ago
- Batch Effect Correction of RNA-seq Data through Sample Distance Matrix Adjustment☆18Updated 4 years ago
- R package of techniques for comparing clusterings of single-cell sequencing data☆40Updated last year
- Bayesian modelling of DNA methylation heterogeneity at single-cell resolution☆23Updated last year
- A public list of computational methods for cell type inference from genome-scale DNA methylation data☆13Updated 6 years ago
- Comparison of dimensionality reduction methods☆30Updated 5 years ago
- Repository for the Epigenomics Tutorial hold at ISMB 2017 in Prague☆14Updated 5 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- Gene-level general linear mixed model☆22Updated 8 months ago
- Moana: Robust cell type classification of single-cell RNA-Seq data☆24Updated 6 years ago
- R wrappers to connect Python dimensional reduction tools and single cell data objects (Seurat, SingleCellExperiment, etc...)☆36Updated 8 months ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆57Updated last year
- Explore and share your scRNAseq clustering results☆50Updated 2 years ago