COMPSRA: a COMprehensive Platform for Small RNA-Seq data Analysis
☆17Jan 4, 2021Updated 5 years ago
Alternatives and similar repositories for COMPSRA
Users that are interested in COMPSRA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Genome free discovery and classification of miRNAs from small RNA-Seq with random forests☆11Jun 12, 2018Updated 7 years ago
- Software for preprocessing, filtering, alignment, and reporting of smallRNA-seq datasets☆23Apr 5, 2023Updated 3 years ago
- Comprehensive analysis of small RNA sequencing data☆35May 14, 2025Updated 11 months ago
- A package to run real time analysis of nanopore methylation data.☆21Apr 12, 2026Updated 3 weeks ago
- Data and additional information from the initial MAS-ISO-seq study, "High-throughput RNA isoform sequencing using programmable cDNA conca…☆12Feb 24, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- direct RNA nanopore sequencing barcode design and demultiplexing☆20Apr 26, 2026Updated last week
- small rna-seq analysis package☆30Nov 7, 2022Updated 3 years ago
- Make rapid visualizations of RNA-seq data in R☆20Oct 7, 2025Updated 6 months ago
- AD regulome analysis☆16Apr 4, 2023Updated 3 years ago
- Running NGS computing demanding applications, e.g reads mapping and counting, wrapped in docker containers.☆26Apr 13, 2025Updated last year
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- single-nucleus nanopore reads processing pipeline☆16Aug 16, 2023Updated 2 years ago
- ☆29Mar 24, 2026Updated last month
- Code examples for working with web based bioinformatics APIs☆10Feb 17, 2017Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- MirMachine, a command line tool to detect microRNA homologs in genome sequences.☆15Apr 26, 2026Updated last week
- Workspace for data science projects and NGS pipelines. Contains RStudio, Jupyter Notebook, VSCode and file manager. Can connect to Tailsc…☆10Aug 25, 2023Updated 2 years ago
- Convert MSP files into a database☆10May 4, 2021Updated 5 years ago
- This repository contains the source code of the revised version of MutPanning. MutPanning is publicly available under the BSD3-Clause ope…☆13Nov 12, 2019Updated 6 years ago
- Generic Interactive Variant Analysis browser☆29Apr 12, 2022Updated 4 years ago
- ☆20Dec 9, 2021Updated 4 years ago
- The ECCsplorer is a bioinformatics pipeline for the automated detection of extrachromosomal circular DNA (eccDNA) from paired-end read da…☆20Apr 15, 2024Updated 2 years ago
- Symbol Representing Hardware And Software Processing Of Sensor Input☆16Aug 2, 2016Updated 9 years ago
- Workflow: Convert CONTROL-freec output to GISTIC2☆10Apr 20, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆12Aug 2, 2020Updated 5 years ago
- A simplified pipeline for ctDNA sequencing data analysis☆38Sep 23, 2017Updated 8 years ago
- pipeline for the analysis of small RNA data☆14Jun 24, 2019Updated 6 years ago
- R tools to interact with hap.py output☆16Jul 12, 2019Updated 6 years ago
- testR implementation in R☆11Aug 31, 2017Updated 8 years ago
- Temporal Pathway Synthesizer☆17Jun 28, 2024Updated last year
- R package for computing Association Plots☆17Nov 4, 2024Updated last year
- CNV Rapid Aberration Detection And Reporting☆12Mar 2, 2021Updated 5 years ago
- Cellsnake tool main repo☆36Feb 22, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- spSeudoMap: cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data☆13Sep 29, 2024Updated last year
- R package arcdiagram☆78Mar 27, 2022Updated 4 years ago
- ☆10Mar 5, 2019Updated 7 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆19Dec 19, 2024Updated last year
- A Transcriptomics-Proteomics Integration Pipeline☆20Apr 11, 2024Updated 2 years ago
- A pan-cancer analysis of the microbiome in metastatic cancer (Battaglia et. al, Cell, 2024)☆14Apr 9, 2024Updated 2 years ago
- Formats Roary output for viewing in FriPan☆11May 23, 2018Updated 7 years ago