Pipelines in genomics
☆23Jun 17, 2026Updated this week
Alternatives and similar repositories for pigx
Users that are interested in pigx are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Two methods for mapping and visualizing associated data on phylogeny using ggtree☆12Dec 25, 2018Updated 7 years ago
- Workflow for SARS-CoV-2 genome Assembly at FioCruz/IAM☆28Feb 6, 2024Updated 2 years ago
- GO FEAT: a rapid web-based functional annotation tool for genomic and transcriptomic data☆19Apr 3, 2024Updated 2 years ago
- Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis☆13Sep 21, 2022Updated 3 years ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post…☆27Oct 14, 2025Updated 8 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆28Jul 18, 2024Updated last year
- ☆12Feb 26, 2019Updated 7 years ago
- Code repository for the HAYSTAC pipeline☆15Oct 25, 2024Updated last year
- Ampseer examines reads in fastq format and identifies which multiplex PCR primer set was used to generate the SARS-CoV-2 sequencing libra…☆15Feb 27, 2024Updated 2 years ago
- Repository for Bioinformatics scripts and basic programs developed by L.M.C☆10Jun 2, 2023Updated 3 years ago
- Small collection of tools for performing quality control on coronavirus sequencing data and genomes☆49May 14, 2026Updated last month
- Do select-group-by on csv and other text files☆14Apr 23, 2022Updated 4 years ago
- Taxonomic classification of viruses at Order and Family level☆21Mar 1, 2023Updated 3 years ago
- Source code of the Bgee pipeline used to build the Bgee database☆12Jun 2, 2026Updated 2 weeks ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- NLP for Common Lisp☆12May 23, 2017Updated 9 years ago
- Illustrating Python via examples from bioinformatics☆14Jun 14, 2016Updated 10 years ago
- CGM 主站☆11Jun 8, 2026Updated last week
- GitHub for CPSC298☆11Aug 4, 2019Updated 6 years ago
- An integrated web-based resource for mapping functional networks of long or circular forms of non-coding RNAs☆10Jul 13, 2019Updated 6 years ago
- Single server/laptop grade file-observatory☆10Mar 30, 2023Updated 3 years ago
- R package with Shiny application for DGE analysis☆12Jan 8, 2024Updated 2 years ago
- A library to create lore plots (logistic regression of the prevalence of a categorical variable in function of a continuous feature)☆18Updated this week
- ☆14Dec 23, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Nanopore SimulatION is a tool for simulating an Oxfornd Nanopore Technologies MinION device for bioinformatic development.☆19Nov 30, 2017Updated 8 years ago
- Principal component analysis plugin for D3.js☆10Aug 20, 2017Updated 8 years ago
- Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data☆14Jan 14, 2018Updated 8 years ago
- Viroid Nominator (VNom): reference free tool for nominating viroid-like de novo assembled contigs☆19Jan 21, 2024Updated 2 years ago
- 16S pipeline using qiime2 created with snakemake☆12Jun 2, 2026Updated 2 weeks ago
- Publication Page for the Noack et al. 2021 Nature Neuroscience paper☆10Feb 7, 2022Updated 4 years ago
- ☆12Oct 10, 2022Updated 3 years ago
- New generation Javascript-based VertNet Georeferencing Calculator☆10Apr 2, 2024Updated 2 years ago
- ☆15Apr 22, 2018Updated 8 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆14Jul 5, 2022Updated 3 years ago
- The Systems Biology Ontology (SBO) is a set of controlled, relational vocabularies of terms commonly used in Systems Biology, and in part…☆12May 16, 2023Updated 3 years ago
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆16Jan 27, 2020Updated 6 years ago
- Python argparse skeleton☆10Feb 9, 2021Updated 5 years ago
- ☆10Dec 4, 2023Updated 2 years ago
- CWL for GDC DNASeq workflows☆24Mar 30, 2026Updated 2 months ago
- GeneNetwork (2nd generation)☆39May 28, 2026Updated 3 weeks ago