Pipelines in genomics
☆23Jun 17, 2026Updated 4 months ago
Alternatives and similar repositories for pigx
Users that are interested in pigx are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Two methods for mapping and visualizing associated data on phylogeny using ggtree☆12Dec 25, 2018Updated 7 years ago
- Workflow for SARS-CoV-2 genome Assembly at FioCruz/IAM☆28Feb 6, 2024Updated 2 years ago
- Instruction and scripts for reconstructing ancestral genome from pairwise syntenic blocks using MLGO☆13Oct 30, 2018Updated 8 years ago
- Genomic Tech's COVID sequencing☆10Mar 16, 2021Updated 5 years ago
- This repository contains training material developed by the Microbial Ecology Group to introduce researchers to the R programming languag…☆12Aug 9, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- bisulfite sequencing pipeline from fastq to methylation reports☆13Aug 25, 2026Updated 2 months ago
- Make rapid visualizations of RNA-seq data in R☆21Oct 7, 2025Updated last year
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post…☆27Oct 2, 2026Updated last month
- ☆12Feb 26, 2019Updated 7 years ago
- GeneNetwork (2nd generation)☆41Updated this week
- DEvis: an R package for aggregation and visualization of differential expression data☆17Dec 9, 2020Updated 5 years ago
- Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis☆13Sep 21, 2022Updated 4 years ago
- GO FEAT: a rapid web-based functional annotation tool for genomic and transcriptomic data☆19Apr 3, 2024Updated 2 years ago
- ☆28Jul 18, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Code for processing data collected by the International Tamoxifen Pharmacogenomics Consortium☆14Apr 13, 2015Updated 11 years ago
- Repository for Bioinformatics scripts and basic programs developed by L.M.C☆10Jun 2, 2023Updated 3 years ago
- Markdown version of Cytoscape manual☆12Sep 30, 2026Updated last month
- Ampseer examines reads in fastq format and identifies which multiplex PCR primer set was used to generate the SARS-CoV-2 sequencing libra…☆15Feb 27, 2024Updated 2 years ago
- Code repository for the HAYSTAC pipeline☆18Oct 25, 2024Updated 2 years ago
- Small collection of tools for performing quality control on coronavirus sequencing data and genomes☆49May 14, 2026Updated 5 months ago
- CGM 主站☆11Jun 8, 2026Updated 4 months ago
- Taxonomic classification of viruses at Order and Family level☆21Mar 1, 2023Updated 3 years ago
- Illumina analysis pipeline☆14Apr 6, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- GitHub for CPSC298☆11Aug 4, 2019Updated 7 years ago
- Set of utilities on sequences and BAM files☆28Oct 27, 2021Updated 5 years ago
- Illustrating Python via examples from bioinformatics☆14Jun 14, 2016Updated 10 years ago
- Client for the Open Citations Corpus☆11Feb 4, 2025Updated last year
- An R package that integrates the installation, execution, and benchmark of cutting-edge computational doublet-detection methods.☆12Dec 4, 2022Updated 3 years ago
- Materials for the MOSAIC "Teaching Statistics with R and RStudio"☆23Jun 22, 2018Updated 8 years ago
- ☆11Jun 28, 2021Updated 5 years ago
- ☆10Apr 30, 2019Updated 7 years ago
- Nanopore SimulatION is a tool for simulating an Oxfornd Nanopore Technologies MinION device for bioinformatic development.☆19Nov 30, 2017Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data☆14Jan 14, 2018Updated 8 years ago
- Validate and edit small eukaryotic genome assemblies☆33Apr 28, 2023Updated 3 years ago
- An integrated web-based resource for mapping functional networks of long or circular forms of non-coding RNAs☆11Jul 13, 2019Updated 7 years ago
- Scripts used frequently by me and maybe usefull for others☆10Jun 3, 2026Updated 5 months ago
- ☆11Sep 11, 2024Updated 2 years ago
- R package with Shiny application for DGE analysis☆13Jan 8, 2024Updated 2 years ago
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆15Jan 27, 2020Updated 6 years ago