Single-CELL rna-seq analysis software
☆39Oct 25, 2017Updated 8 years ago
Alternatives and similar repositories for scell
Users that are interested in scell are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The code and analyses accompanying the manuscript “MetaMap: An atlas of metatranscriptomic reads in human disease-related RNA-seq data”.☆12Nov 28, 2018Updated 7 years ago
- Annotation and Prediction of Oncogenic Gene Fusions in RNAseq☆12Feb 20, 2016Updated 10 years ago
- ☆19Mar 6, 2019Updated 7 years ago
- Source code for ScanGEO Shiny App☆15Apr 18, 2022Updated 4 years ago
- Use gene expression to predict phenotype sample information☆19Feb 13, 2018Updated 8 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆19Jul 6, 2023Updated 2 years ago
- A server for maintaining high-throughput sequencing QC data☆13Aug 5, 2025Updated 9 months ago
- ☆15Dec 9, 2019Updated 6 years ago
- ☆20Feb 24, 2017Updated 9 years ago
- Virtual Pharmacist is a web tool that interprets personal genome for the impact of genetic variation on drug response. It can take varian…☆13Nov 16, 2015Updated 10 years ago
- LaTeX template of graduate Thesis [University of Chinese Academy of Sciences]☆12Nov 7, 2017Updated 8 years ago
- Convert BAM files to bigWig files with a simple command☆20Nov 30, 2018Updated 7 years ago
- Algorithm for detecting alternative splicing in a population of single cells. See details in Welch et al., Nucleic Acids Research 2016: h…☆23Jul 7, 2016Updated 9 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data.☆44Mar 3, 2017Updated 9 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- synchronize your wordpress or github to hugo website automaticlly☆15Nov 2, 2021Updated 4 years ago
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆16Jul 3, 2012Updated 13 years ago
- A pipeline for scRNA-seq data analysis☆15Mar 26, 2025Updated last year
- SPP - R package for analysis of ChIP-seq and other functional sequencing data☆43Jul 6, 2021Updated 4 years ago
- Scripts needed to generate the figures for the Monocle 2 paper (Qiu et al, 2017)☆29Jul 1, 2020Updated 5 years ago
- Memory efficient clustering in R for large datasets☆22Aug 22, 2022Updated 3 years ago
- A light weight shiny based web app to access TCGA data☆15Apr 29, 2015Updated 11 years ago
- simpler single cell RNAseq data Visualization☆12Feb 28, 2025Updated last year
- ☆12Jul 30, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Processing of single cell RNAseq data for the recovery of TCRs in python☆30Nov 25, 2020Updated 5 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆17Nov 20, 2018Updated 7 years ago
- Differential Mutation Analysis☆11May 24, 2020Updated 5 years ago
- ☆14Aug 30, 2025Updated 8 months ago
- Interactive Differential Expression Analyzer☆37Sep 7, 2020Updated 5 years ago
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆12Jun 11, 2019Updated 6 years ago
- GWAS SNP Regulatory Analysis Tool☆17Mar 19, 2015Updated 11 years ago
- Batch effects and the effective design of single-cell gene expression studies☆105Jul 23, 2019Updated 6 years ago
- A tool to plot significant regions of GWAS☆29Jan 27, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- 软件方面的包 (包括各种芯片数据处理,NGS数据处理,差异分析等等!)☆14Apr 23, 2016Updated 10 years ago
- ☆20Apr 28, 2026Updated last week
- The analysis pipeline for FLEP-seq☆17Aug 18, 2023Updated 2 years ago
- Single cell interactive plotting tools☆24Jun 12, 2020Updated 5 years ago
- wgs_pipeline☆18Dec 3, 2013Updated 12 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. Please download the R package from the RaceID3…☆15Dec 7, 2018Updated 7 years ago
- ClustVis web tool☆56Jun 15, 2020Updated 5 years ago