Single-CELL rna-seq analysis software
☆39Oct 25, 2017Updated 8 years ago
Alternatives and similar repositories for scell
Users that are interested in scell are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The code and analyses accompanying the manuscript “MetaMap: An atlas of metatranscriptomic reads in human disease-related RNA-seq data”.☆12Nov 28, 2018Updated 7 years ago
- Annotation and Prediction of Oncogenic Gene Fusions in RNAseq☆12Feb 20, 2016Updated 10 years ago
- ☆19Mar 6, 2019Updated 7 years ago
- Source code for ScanGEO Shiny App☆15Apr 18, 2022Updated 3 years ago
- Use gene expression to predict phenotype sample information☆19Feb 13, 2018Updated 8 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆19Jul 6, 2023Updated 2 years ago
- A server for maintaining high-throughput sequencing QC data☆13Aug 5, 2025Updated 8 months ago
- ☆15Dec 9, 2019Updated 6 years ago
- ☆20Feb 24, 2017Updated 9 years ago
- Virtual Pharmacist is a web tool that interprets personal genome for the impact of genetic variation on drug response. It can take varian…☆13Nov 16, 2015Updated 10 years ago
- LaTeX template of graduate Thesis [University of Chinese Academy of Sciences]☆12Nov 7, 2017Updated 8 years ago
- Convert BAM files to bigWig files with a simple command☆20Nov 30, 2018Updated 7 years ago
- Algorithm for detecting alternative splicing in a population of single cells. See details in Welch et al., Nucleic Acids Research 2016: h…☆23Jul 7, 2016Updated 9 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data.☆43Mar 3, 2017Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- synchronize your wordpress or github to hugo website automaticlly☆15Nov 2, 2021Updated 4 years ago
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆16Jul 3, 2012Updated 13 years ago
- A pipeline for scRNA-seq data analysis☆15Mar 26, 2025Updated last year
- SPP - R package for analysis of ChIP-seq and other functional sequencing data☆43Jul 6, 2021Updated 4 years ago
- Scripts needed to generate the figures for the Monocle 2 paper (Qiu et al, 2017)☆29Jul 1, 2020Updated 5 years ago
- Memory efficient clustering in R for large datasets☆22Aug 22, 2022Updated 3 years ago
- A light weight shiny based web app to access TCGA data☆15Apr 29, 2015Updated 10 years ago
- simpler single cell RNAseq data Visualization☆10Feb 28, 2025Updated last year
- ☆12Jul 30, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Processing of single cell RNAseq data for the recovery of TCRs in python☆30Nov 25, 2020Updated 5 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆17Nov 20, 2018Updated 7 years ago
- Differential Mutation Analysis☆11May 24, 2020Updated 5 years ago
- ☆14Aug 30, 2025Updated 7 months ago
- Interactive Differential Expression Analyzer☆37Sep 7, 2020Updated 5 years ago
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆12Jun 11, 2019Updated 6 years ago
- GWAS SNP Regulatory Analysis Tool☆17Mar 19, 2015Updated 11 years ago
- Batch effects and the effective design of single-cell gene expression studies☆105Jul 23, 2019Updated 6 years ago
- A tool to plot significant regions of GWAS☆29Jan 27, 2023Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- 软件方面的包 (包括各种芯片数据处理,NGS数据处理,差异分析等等!)☆14Apr 23, 2016Updated 9 years ago
- ☆20Oct 29, 2025Updated 5 months ago
- The analysis pipeline for FLEP-seq☆17Aug 18, 2023Updated 2 years ago
- Single cell interactive plotting tools☆24Jun 12, 2020Updated 5 years ago
- wgs_pipeline☆18Dec 3, 2013Updated 12 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. Please download the R package from the RaceID3…☆15Dec 7, 2018Updated 7 years ago
- ClustVis web tool☆56Jun 15, 2020Updated 5 years ago