[Nature Communications] O2VAE: a model for orientation-invariant representation learning (phenotyping) in cell biology data
☆38Mar 26, 2025Updated 11 months ago
Alternatives and similar repositories for o2vae
Users that are interested in o2vae are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- [CVPR 2025] MicroVQA eval and 🤖RefineBot code for "MicroVQA: A Multimodal Reasoning Benchmark for Microscopy-Based Scientific Research"…☆34Nov 25, 2025Updated 3 months ago
- [CVPR 2025] BIOMEDICA: An Open Biomedical Image-Caption Archive, Dataset, and Vision-Language Models Derived from Scientific Literature☆95Mar 22, 2025Updated last year
- MorphoFeatures code and data☆22May 4, 2023Updated 2 years ago
- Self-supervised models for encoding protein localization patterns from microscopy images☆83Aug 5, 2025Updated 7 months ago
- ShapeEmbedLite: a lightweight self-supervised representation learning model for 2D shape analysis☆21Oct 13, 2025Updated 5 months ago
- Official repository for BagPype - Biomolecular atomistic graph construction software in Python for proteins etc☆23Apr 16, 2024Updated last year
- ☆41Sep 9, 2025Updated 6 months ago
- Graphical Visualization of Spectral Response from a SparkFun AS7265x Spectral Triad module using Python 2.7.x☆29Aug 11, 2020Updated 5 years ago
- Gpu accelerated vahadane stain normalization for Digital Pathology workflows.☆27Feb 23, 2024Updated 2 years ago
- A deep learning-based framework to uniquely identify an uncorrelated, isometric and meaningful latent representation.☆20Sep 12, 2023Updated 2 years ago
- [NeurIPS 2023] Official Pytorch code for LOVM: Language-Only Vision Model Selection☆21Feb 3, 2024Updated 2 years ago
- [ICLR 2025] Video Action Differencing☆52Jul 3, 2025Updated 8 months ago
- [CVPR 2025] Custom Open CLIP repo to train biomedical CLIP models☆35Mar 23, 2025Updated last year
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆38Feb 6, 2026Updated last month
- Process images using SimpleITK in napari☆23May 1, 2025Updated 10 months ago
- A tool for rapidly labeling objects using deep learning feature embedding☆34Updated this week
- repository associated to our pipeline for lipid dynamics☆15Jun 17, 2024Updated last year
- A platform for compiling, analyzing, and exploring tracking data☆49Feb 2, 2026Updated last month
- A tutorial of classical shape analysis methods☆11Nov 25, 2023Updated 2 years ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆72Sep 29, 2024Updated last year
- ☆12Oct 7, 2020Updated 5 years ago
- Public release of Monoqlo Python code☆10Apr 19, 2022Updated 3 years ago
- Guides and code for 3D nuclear instance segmentation☆23Dec 2, 2025Updated 3 months ago
- torchlogic is a pytorch framework for developing Neuro-Symbolic AI systems and implements Neural Reasoning Networks.☆17Sep 18, 2025Updated 6 months ago
- Aligned Diffusion Schroedinger Bridges (UAI 2023)☆13Sep 18, 2025Updated 6 months ago
- Python 3 library for the augmentation & normalization of H&E images☆65Sep 12, 2022Updated 3 years ago
- OTTR for making courses! This is a template repo that helps people write 1 course but publish it in three places. Rendered example: https…☆18Apr 1, 2025Updated 11 months ago
- Official implementation of "Connect, Collapse, Corrupt: Learning Cross-Modal Tasks with Uni-Modal Data" (ICLR 2024)☆34Oct 16, 2024Updated last year
- mdml: Deep Learning for Molecular Simulations☆53May 17, 2025Updated 10 months ago
- A python algorithm for tracking cells in 3D deforming organs☆69Nov 13, 2025Updated 4 months ago
- TS2CG version 2☆26Feb 28, 2026Updated 3 weeks ago
- A napari plugin for making animations☆95Feb 1, 2026Updated last month
- Histopathology Feature Extractors (2024)☆14Jun 14, 2024Updated last year
- Thermodynamically Explainable Representations of AI and other black-box Paradigms☆35Nov 3, 2024Updated last year
- DyNoPy☆11Sep 5, 2024Updated last year
- Correlation-based feature selection of Molecular Dynamics simulations☆29Nov 25, 2025Updated 3 months ago
- Radiology Language Evaluations☆11Nov 17, 2023Updated 2 years ago
- This repository contains the source code for the Semantic Knowledge Extractor Tool (SKET). SKET is an unsupervised hybrid knowledge extra…☆13Apr 18, 2023Updated 2 years ago
- ☆14Feb 28, 2022Updated 4 years ago