bittremieux-lab / ANN-SoLoLinks
Spectral library searching using approximate nearest neighbor techniques.
☆43Updated last month
Alternatives and similar repositories for ANN-SoLo
Users that are interested in ANN-SoLo are comparing it to the libraries listed below
Sorting:
- Fast and flexible semi-supervised learning for peptide detection in Python☆44Updated 3 months ago
- A Python interface to proteomics data repositories☆34Updated last week
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆49Updated 2 weeks ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆44Updated 3 months ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆46Updated this week
- Community-curated tutorials and datasets for ML in proteomics☆54Updated 2 months ago
- Python package for investigating the structural context of PTMs☆28Updated 5 months ago
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆51Updated 2 weeks ago
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆65Updated 2 weeks ago
- ☆13Updated last year
- ☆24Updated 2 years ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆27Updated 2 weeks ago
- ☆10Updated last week
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆24Updated last month
- Rescoring and spectral library generation pipeline for proteomics.☆43Updated this week
- Some hopefully useful tools for mass spectrometry applied to proteomics☆52Updated 3 years ago
- ☆62Updated last year
- Democratizing ML in proteomics☆37Updated this week
- ☆20Updated 4 months ago
- ☆26Updated last month
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆87Updated 2 months ago
- An open-source Python package to unify raw MS data accession and storage.☆25Updated 2 months ago
- PDV: an integrative proteomics data viewer☆48Updated 2 months ago
- A simple tool to help you manually discover the depths of your (complex) spectra, one spectrum at a time.☆26Updated 3 weeks ago
- A python package for fast post translational modification localization, powered by Cython.☆19Updated last year
- A modest Feature Finder (moFF) to extract MS1 intensities from Thermo raw file☆33Updated 4 years ago
- ☆26Updated last year
- ☆34Updated 2 weeks ago
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Updated 2 years ago
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆21Updated 2 months ago