kevinkovalchik / RawToolsLinks
RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control analysis of Thermo Orbitrap raw mass spectrometer files from data-dependent acquisition experiments.
☆66Updated last week
Alternatives and similar repositories for RawTools
Users that are interested in RawTools are comparing it to the libraries listed below
Sorting:
- Instrument Application Programming Interface☆51Updated 2 months ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆50Updated this week
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆98Updated 2 months ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆49Updated 9 months ago
- Thermo RAW file parser that runs on Linux/Mac and all other platforms that support Mono☆232Updated last month
- Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics☆123Updated 5 months ago
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆90Updated last month
- Rescoring and spectral library generation pipeline for proteomics.☆52Updated this week
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆47Updated last week
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆24Updated 2 months ago
- ☆44Updated 9 months ago
- DeepLC: Retention time prediction for peptides carrying any modification.☆72Updated last week
- Thermo MSFileReader Python bindings☆69Updated 4 years ago
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆53Updated last week
- asari, metabolomics data preprocessing☆55Updated 2 weeks ago
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆92Updated 2 weeks ago
- ☆30Updated 2 years ago
- Democratizing ML in proteomics☆51Updated 2 weeks ago
- Python Package for the downstream analysis of mass-spectrometry-based proteomics data☆78Updated last month
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆31Updated last year
- HUPO-PSI mass spectrometry CV☆39Updated last week
- ☆13Updated last year
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆32Updated 2 months ago
- Python package for efficient mass spectrometry data processing and visualization☆161Updated this week
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆29Updated last month
- ☆27Updated 7 months ago
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆60Updated last month
- ☆65Updated 9 months ago
- Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful fo…☆92Updated 2 years ago
- .NET DLL wrapper for reading Thermo .Raw files. Uses ThermoFisher.CommonCore NuGet packages provided by Thermo Fisher Scientific☆39Updated 5 months ago