biosustain / goodbye-genbank
A Python package for Biopython that gives feature annotations from GenBank records a new and better life
☆14Updated 9 years ago
Alternatives and similar repositories for goodbye-genbank
Users that are interested in goodbye-genbank are comparing it to the libraries listed below
Sorting:
- http://www.combio.pl/alfree☆23Updated 2 years ago
- Malleable All-seeing Journal Of Research Artifacts☆36Updated last year
- Protein Alignment and Detection Interface☆61Updated last year
- ☆14Updated 6 years ago
- Bacterial Annotation by Learned Representation of Genes☆55Updated 4 years ago
- annotation pipeline for microbial genomes and metagenomes☆18Updated 7 years ago
- A list of weak Bacterial assemblies in GenBank☆18Updated 7 years ago
- PARTIE is a program to partition sequence read archive (SRA) metagenomics data into amplicon and shotgun data sets. The user-supplied ann…☆26Updated 2 years ago
- Convert genbank files to a swath of other formats☆18Updated last year
- Predicting biosynthetic gene clusters in genomes☆36Updated 11 years ago
- Find Unique genomic Regions☆29Updated last month
- Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.☆36Updated 2 months ago
- Digital Database of Microbial Phenotypes. Like an online Bergey's Manual.☆13Updated 13 years ago
- ☆19Updated 8 years ago
- exploring viral genome assembly with variation graph tools☆19Updated 5 years ago
- Find common blocks and differences between DNA sequences☆42Updated last month
- blast, shmlast☆22Updated 4 years ago
- Utility program for extracting sequences from a fasta/fastq file☆36Updated 4 months ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated 11 months ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 3 years ago
- Interactive phylogenetic tree viewer/editor☆47Updated last year
- MicrobeDirectory 2.0☆22Updated 4 years ago
- abi2fastq is a small utility to convert Sanger sequencing reads in .abi (applied biosystems) format to FASTQ☆11Updated 7 years ago
- Create and maintain phylogenetic "reference packages" of biological sequences.☆21Updated last month
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Updated 6 years ago
- ☆13Updated 7 years ago
- Annotate sequences from BLAST against KEGG DB with KO numbers and summarize them in KEGG modules.☆22Updated 6 years ago
- Tandem Repeat Annotation Library☆25Updated 2 years ago
- Python bindings for the TaxonKit library☆39Updated this week
- benchmarking and containerization of tools for analysis of complex non-clinical metagenomes.☆21Updated 6 years ago