biosustain / goodbye-genbankLinks
A Python package for Biopython that gives feature annotations from GenBank records a new and better life
☆14Updated 9 years ago
Alternatives and similar repositories for goodbye-genbank
Users that are interested in goodbye-genbank are comparing it to the libraries listed below
Sorting:
- Malleable All-seeing Journal Of Research Artifacts☆36Updated 2 years ago
- http://www.combio.pl/alfree☆23Updated 2 years ago
- PARTIE is a program to partition sequence read archive (SRA) metagenomics data into amplicon and shotgun data sets. The user-supplied ann…☆26Updated 2 years ago
- Find common blocks and differences between DNA sequences☆42Updated 2 months ago
- Find Unique genomic Regions☆29Updated 2 months ago
- Convert genbank files to a swath of other formats☆18Updated last year
- a Contig Alignment Tool for Pairwise Assembly Comparison☆13Updated 5 years ago
- blast, shmlast☆22Updated 4 years ago
- Extract lineage CSVs from NCBI for use with sourmash lca.☆28Updated last year
- Biological Graphic tool in Python☆34Updated 5 years ago
- ☆14Updated 6 years ago
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆35Updated 4 years ago
- Protein Alignment and Detection Interface☆61Updated last year
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 3 years ago
- annotation pipeline for microbial genomes and metagenomes☆18Updated 7 years ago
- Bacterial Annotation by Learned Representation of Genes☆55Updated 4 years ago
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Updated 6 years ago
- Assembling the cause of phenotypes and genotypes from NGS data☆29Updated 4 years ago
- ☆22Updated last year
- exploring viral genome assembly with variation graph tools☆20Updated 5 years ago
- Tandem Repeat Annotation Library☆25Updated 2 years ago
- Open-source opinionated Galaxy-based framework for microbiota analysis☆14Updated 4 years ago
- Get, parse, and extract information from the SRA metadata files☆41Updated 2 years ago
- Detection of incorrectly labeled sequences across kingdoms☆86Updated 2 years ago
- ☆19Updated 8 years ago
- This program dereplicates and/or filter nucleotide and/or protein database from a list of names or sequences (by exact match).☆15Updated 6 years ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆31Updated 2 years ago
- Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.☆36Updated last week
- Ultra-efficient taxonomic mapping of NGS data☆51Updated 4 years ago
- Bioinformatics pipeline for nanopore sequencing data☆11Updated 6 years ago