jwintersinger / kablammoLinks
Interactive, web-based BLAST results visualization tool. Accessible at https://kablammo.wasmuthlab.org.
☆67Updated 2 years ago
Alternatives and similar repositories for kablammo
Users that are interested in kablammo are comparing it to the libraries listed below
Sorting:
- Protein Alignment and Detection Interface☆61Updated last year
- de novo virus assembler of Illumina paired reads☆56Updated 4 years ago
- Detection of incorrectly labeled sequences across kingdoms☆86Updated 2 years ago
- An imagemagick-like frontend to Biopython SeqIO☆116Updated last year
- Blast2Bam uses the XML results of Blastn, the reference and the fastQ or fasta file(s) to output a SAM file.☆49Updated 4 years ago
- visualising sequence similarity with Circos☆41Updated 6 years ago
- Workflows I find helpful for fungal genome annotation☆21Updated 2 years ago
- Flexible circular visualization of genome-associated data with BioPerl and SVG.☆47Updated 6 years ago
- Bacterial Annotation by Learned Representation of Genes☆58Updated 4 years ago
- Automated Sanger Analysis Pipeline (ASAP): a tool for rapidly analyzing Sanger sequencing data with minimum user interference.☆25Updated 7 months ago
- Visualize whole genome alignments as linear maps☆73Updated last month
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆35Updated 4 years ago
- Tools for detecting DNA modifications from single molecule, real-time sequencing data☆25Updated 3 years ago
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆76Updated 9 years ago
- YAMP: Yet Another Metagenomic Pipeline☆60Updated 2 years ago
- MEGAN Community Edition☆72Updated last year
- Miscellaneous Bioinformatics scripts etc mostly in Python☆45Updated last week
- A selection of short scripts for analyzing microbial genomes☆14Updated 7 years ago
- A versatile toolkit for k-mers with taxonomic information☆79Updated 2 weeks ago
- Code for design of diagnostic PCR primers, and metabarcoding markers.☆62Updated last year
- Error correction for Illumina RNA-seq reads☆67Updated last year
- PARTIE is a program to partition sequence read archive (SRA) metagenomics data into amplicon and shotgun data sets. The user-supplied ann…☆25Updated 2 years ago
- A fork of exonerate: a generic tool for sequence alignment☆70Updated last year
- High throughput protein function annotation with Human Readable Description (HRDs) and Gene Ontology (GO) Terms.☆67Updated 2 years ago
- De novo Extraction of Strains from MetAgeNomes☆70Updated 5 years ago
- This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye…☆58Updated 4 years ago
- Browser based application for viewing bam alignments☆56Updated 8 years ago
- Visualization of the pan-genome output by panX☆63Updated 2 months ago
- Computational workflows for metagenomics tasks, by the Bhatt lab☆47Updated 2 years ago
- Reduced Alphabet based Protein similarity Search☆40Updated 4 years ago