jwintersinger / kablammoLinks
Interactive, web-based BLAST results visualization tool. Accessible at https://kablammo.wasmuthlab.org.
☆68Updated 2 years ago
Alternatives and similar repositories for kablammo
Users that are interested in kablammo are comparing it to the libraries listed below
Sorting:
- Protein Alignment and Detection Interface☆61Updated last year
- A simple command-line tool to download data from Joint Genome Institute databases☆52Updated 2 years ago
- de novo virus assembler of Illumina paired reads☆56Updated 4 years ago
- SINA - Reference based multiple sequence alignment☆42Updated 4 years ago
- An imagemagick-like frontend to Biopython SeqIO☆115Updated last year
- From genomes to phenotypes: Traitar, the microbial trait analyzer☆59Updated 5 years ago
- ☆27Updated 5 years ago
- De novo Extraction of Strains from MetAgeNomes☆70Updated 5 years ago
- Blast2Bam uses the XML results of Blastn, the reference and the fastQ or fasta file(s) to output a SAM file.☆48Updated 4 years ago
- visualising sequence similarity with Circos☆41Updated 6 years ago
- Detection of incorrectly labeled sequences across kingdoms☆85Updated 2 years ago
- An ultrafast optimal aligner for mapping large NGS data to large genome databases.☆58Updated last year
- StrainFinder☆27Updated 7 years ago
- Highly customizable, ambiguity-aware dotplots for visual sequence analyses☆91Updated last month
- EMIRGE reconstructs full length ribosomal genes from short read sequencing data.☆38Updated last year
- Bacterial Annotation by Learned Representation of Genes☆55Updated 4 years ago
- Sample search by metadata and features☆47Updated last year
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆35Updated 4 years ago
- http://www.combio.pl/alfree☆23Updated 3 years ago
- Computational workflows for metagenomics tasks, by the Bhatt lab☆47Updated 2 years ago
- A fork of exonerate: a generic tool for sequence alignment☆67Updated last year
- Python3 scripts to manipulate FASTA and FASTQ files☆71Updated 3 months ago
- Code for design of diagnostic PCR primers, and metabarcoding markers.☆62Updated last year
- PARTIE is a program to partition sequence read archive (SRA) metagenomics data into amplicon and shotgun data sets. The user-supplied ann…☆26Updated 2 years ago
- Calculates the lowest common ancestors of each query sequence in a Blast result☆31Updated 7 years ago
- Flexible circular visualization of genome-associated data with BioPerl and SVG.☆47Updated 6 years ago
- YAMP: Yet Another Metagenomic Pipeline☆60Updated 2 years ago
- SARS-CoV-2 workflow for nanopore sequence data☆41Updated last month
- MetaPathways v2.0: A master-worker model for environmental Pathway/Genome Database construction on grids and clouds☆33Updated 9 years ago