Specter: linear deconvolution for targeted analysis of data-independent acquisition mass spectrometry proteomics
☆18Oct 11, 2018Updated 7 years ago
Alternatives and similar repositories for Specter
Users that are interested in Specter are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Package for analyzing MS with Python☆10Jan 11, 2018Updated 8 years ago
- Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.☆17Feb 28, 2026Updated last month
- pyQms, generalized, fast and accurate mass spectrometry data quantification☆28Jan 7, 2026Updated 3 months ago
- Analytical R Tools for Mass Spectrometry☆14Oct 30, 2025Updated 5 months ago
- Spectral library searching using approximate nearest neighbor techniques.☆49Feb 11, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A collection of awesome lipidomics tools and resources☆17Jun 23, 2022Updated 3 years ago
- Group-DIA, a software for analyzing multiple DIA data files☆13Dec 5, 2016Updated 9 years ago
- Some hopefully useful tools for mass spectrometry applied to proteomics☆53Oct 12, 2021Updated 4 years ago
- Chemometric analysis methods implemented in python☆14Jul 13, 2025Updated 9 months ago
- Automatically exported from code.google.com/p/mstoolkit☆30Dec 1, 2025Updated 4 months ago
- mz.unity is an R package for detecting and exploring complex relationships in accurate-mass mass spectrometry data☆14Apr 9, 2016Updated 10 years ago
- Flash entropy search☆16Sep 24, 2023Updated 2 years ago
- MS File ToolBox - tools for parsing some mass-spectrometry related file formats (mzML, mzXML, pep.xml, prot.xml, etc.)☆12Aug 26, 2022Updated 3 years ago
- A versatile tool for the rapid alignment of 1D NMR spectra☆19Sep 8, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A high throughput GC-MS analysis pipeline built on the Python PyMS library☆11Feb 12, 2018Updated 8 years ago
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Aug 25, 2022Updated 3 years ago
- A declarative API for writing XML documents for HUPO PSI-MS mzML and mzIdentML☆23Jan 19, 2025Updated last year
- Repository for mzML and the corresponding examples☆36Apr 5, 2024Updated 2 years ago
- An open-source Python package to unify raw MS data accession and storage.☆31Updated this week
- Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful fo…☆92Aug 17, 2023Updated 2 years ago
- ☆24Feb 26, 2023Updated 3 years ago
- ☆22Jun 28, 2021Updated 4 years ago
- libChEBIpy: a Python API for accessing the ChEBI database☆25Aug 26, 2025Updated 7 months ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Using deep learning to generate in silico spectral libraries for data-independent acquisition analysis.☆43Oct 23, 2022Updated 3 years ago
- Repeat-injection-based quality control, batch correction, exploration, & data cleaning.☆11Mar 16, 2026Updated 3 weeks ago
- An modular and extensible app for visualization of mass spectrometry data and optimization of data acquisition.☆27Mar 17, 2025Updated last year
- Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provi…☆151Mar 11, 2026Updated last month
- Estimation of isoelectric point of peptides and proteins using support vector machines (SVM).☆10Sep 10, 2016Updated 9 years ago
- Semi-supervised learning for peptide identification from shotgun proteomics datasets☆144Nov 21, 2025Updated 4 months ago
- Visualization of multiple tandem mass spectrometry data☆10Jun 15, 2020Updated 5 years ago
- Tool for reliability assessment of omics peprocessing☆11Jan 13, 2026Updated 3 months ago
- GC/LC-MS data analysis for environmental science☆17May 20, 2025Updated 10 months ago
- Deploy open-source AI quickly and easily - Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Recommendations to contenarized your bioinformatics software☆12May 30, 2018Updated 7 years ago
- A known-to-unknown metabolite identification workflow☆21Sep 15, 2020Updated 5 years ago
- Tools for analysis of Mass Spectrometry data using the Wasserstein metric☆18Nov 19, 2024Updated last year
- DeepMass is a suite of tools to enable mass spectrometry data analysis using modern machine learning techniques.☆53Nov 18, 2021Updated 4 years ago
- Recursive wavelet peak detection and deconvolution☆16Dec 17, 2019Updated 6 years ago
- Stack denoising autoencoder (SdA) code in "Deep learning based functional site-level and UTR-level human miRNA target prediction"☆11May 7, 2019Updated 6 years ago
- The R for Mass Spectrometry meta-package☆18Apr 5, 2026Updated last week