rpeckner-broad / Specter

Related projects: ⓘ

• MannLabs / alpharaw
  An open-source Python package to unify raw MS data accession and storage.
  ☆16Updated this week
• pyQms / pyqms
  pyQms, generalized, fast and accurate mass spectrometry data quantification
  ☆28Updated 2 months ago
• pFindStudio / pDeep3
  MS/MS prediction for peptides
  ☆22Updated 3 years ago
• grosenberger / easypqp
  EasyPQP: Simple library generation for OpenSWATH
  ☆10Updated last month
• compomics / ms2pip
  MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.
  ☆37Updated this week
• MannLabs / alphadia
  modular & open DIA search
  ☆41Updated this week
• statisticalbiotechnology / diffacto
  ☆13Updated 6 months ago
• HUPO-PSI / mzSpecLib
  mzSpecLib: A standard format to exchange/distribute spectral libraries
  ☆24Updated last week
• abdrakhimov1 / Biosaur
  ☆14Updated 2 years ago
• lkytal / PredFull
  This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network
  ☆27Updated last year
• msproteomicstools / msproteomicstools
  Some hopefully useful tools for mass spectrometry applied to proteomics
  ☆52Updated 2 years ago
• MRMkit / MRMkit
  ☆8Updated last week
• mobiusklein / ms_peak_picker
  A small library to provide peak picking for software processing mass spectrometry data
  ☆20Updated 2 weeks ago
• MarcIsak / MSLibrarian
  MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics
  ☆14Updated 2 years ago
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆41Updated last week
• fickludd / dinosaur
  Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.
  ☆41Updated 2 years ago
• MatteoLacki / timspy
  ☆16Updated 3 years ago
• computational-metabolomics / msPurity
  R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆15Updated 4 months ago
• lmsac / DeepDIA
  Using deep learning to generate in silico spectral libraries for data-independent acquisition analysis.
  ☆41Updated last year
• Villen-Lab / pyAscore
  A python package for fast post translational modification localization, powered by Cython.
  ☆18Updated 9 months ago
• statisticalbiotechnology / maracluster
  Matthew The's implementation of MaRaCluster
  ☆11Updated last year
• hcji / DeepMASS
  A known-to-unknown metabolite identification workflow
  ☆19Updated 4 years ago
• gtluu / timsconvert
  ☆29Updated this week
• PyProphet / pyprophet
  PyProphet: Semi-supervised learning and scoring of OpenSWATH results.
  ☆29Updated 8 months ago
• MetaSys-LISBP / IsoCor
  IsoCor: Isotope Correction for mass spectrometry labeling experiments
  ☆24Updated 10 months ago
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆13Updated last year
• mohimanilab / molDiscovery
  ☆15Updated 2 years ago
• MannLabs / alphaviz
  AlphaViz is a cutting-edge browser-based interactive visualization tool allowing to visualize the processed mass spectrometry data acquir…
  ☆30Updated 4 months ago
• compomics / DeepLC
  DeepLC: Retention time prediction for (modified) peptides using Deep Learning.
  ☆52Updated this week
• MannLabs / structuremap
  Python package for investigating the structural context of PTMs
  ☆26Updated 8 months ago