rformassspectrometry / MsCoreUtilsLinks
Core Utils for Mass Spectrometry Data
☆17Updated 5 months ago
Alternatives and similar repositories for MsCoreUtils
Users that are interested in MsCoreUtils are comparing it to the libraries listed below
Sorting:
- R interface to Chemical Translation Service (CTS)☆16Updated last year
- Chemical Similarity Enrichment analysis of metabolomics datasets☆29Updated last year
- These workshops and tutorials provide use cases and examples for mass spectrometry data handling and analysis using the Spectra Bioconduc…☆21Updated last year
- This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics da…☆16Updated 4 years ago
- Metabolomics Tools for Galaxy☆21Updated 8 years ago
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Updated 5 years ago
- Assigning precursor-product ion relationships in indiscriminant MS/MS data☆14Updated last week
- The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.☆34Updated 4 years ago
- A collection of common mz values found in mass spectrometry.☆20Updated last year
- QC systems for metabolomics studies☆10Updated this week
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆12Updated last year
- Nextflow-powered MS-DIAL☆10Updated 8 months ago
- R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software☆10Updated 8 years ago
- ☆25Updated last year
- pathway and network analysis for metabolomics☆42Updated last year
- Rocker image for metabolomics data analysis☆13Updated 3 months ago
- The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of ma…☆46Updated last month
- Missing value imputation and evaluation, especially for metabolomics data sets☆18Updated 7 years ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆23Updated 3 months ago
- R Interface to the Metabolights REST API☆11Updated last month
- data processing for MS-based metabolomics☆15Updated 10 months ago
- metabolite identification R-package for metabolomic high-resolution LC-MS datasets.☆15Updated 8 years ago
- Supplementary material for the paper "Improved batch correction in untargeted MS-based metabolomics" by R. Wehrens, et al. Metabolomics, …☆15Updated 6 years ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆19Updated last year
- Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics☆11Updated 3 months ago
- High level functionality to support and simplify metabolomics data annotation.☆16Updated 3 months ago
- This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data…☆45Updated 2 weeks ago
- R/Bioconductor package - STRUCT (STatistics in R Using Class Templates) Toolbox: An extensive set of data (pre-)processing and analysis m…☆10Updated 3 months ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- Risa allows to access metadata/data in ISA-tab format and builds Bioconductor data structures. Apart from parsing ISA-tab files, the pack…☆20Updated 6 years ago