rformassspectrometry / MsCoreUtils

Related projects ⓘ

Alternatives and complementary repositories for MsCoreUtils

• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆19Updated 5 months ago
• cbroeckl / RAMClustR
  Assigning precursor-product ion relationships in indiscriminant MS/MS data
  ☆12Updated 6 months ago
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆27Updated 4 months ago
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆18Updated 10 months ago
• ipb-halle / MetFragR
  R package for MetFrag
  ☆24Updated 7 years ago
• Viant-Metabolomics / Galaxy-M
  Metabolomics Tools for Galaxy
  ☆21Updated 8 years ago
• rformassspectrometry / MetaboCoreUtils
  Core utilities for metabolomics.
  ☆9Updated last month
• YasinEl / mzRAPP
  Tool for reliability assessment of omics peprocessing
  ☆10Updated 9 months ago
• gggraca / MetaboAnnotatoR
  Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets
  ☆12Updated 2 years ago
• eMetaboHUB / MS-CleanR
  ☆25Updated 11 months ago
• KujawinskiLaboratory / Autotuner
  This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics da…
  ☆16Updated 3 years ago
• cpanse / protViz
  Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics
  ☆11Updated 11 months ago
• fgcz / rawDiag
  Brings Orbitrap mass spectrometry data to life; multi-platform, fast and colorful R package
  ☆36Updated 6 months ago
• alexandrovteam / curatr
  ☆14Updated last year
• rformassspectrometry / QFeatures
  Quantitative features for mass spectrometry data
  ☆25Updated last month
• rformassspectrometry / metaRbolomics-book
  The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.
  ☆33Updated 3 years ago
• rformassspectrometry / MetaboAnnotation
  High level functionality to support and simplify metabolomics data annotation.
  ☆15Updated this week
• ZhuMSLab / DecoMetDIA
  ☆10Updated 2 years ago
• Vitek-Lab / MSstatsTMT
  R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …
  ☆26Updated last week
• MASHUOA / HiTMaP
  An R package of High-resolution Informatics Toolbox for Maldi-imaging Proteomics
  ☆15Updated last week
• zamboni-lab / SLAW
  Scalable and self-optimizing processing workflow for untargeted LC-MS
  ☆28Updated 3 months ago
• phenomecentre / peakPantheR
  On-instrument and post-acquisition targeted feature extraction
  ☆12Updated 6 months ago
• WandeRum / MVI-evaluation
  Missing value imputation and evaluation, especially for metabolomics data sets
  ☆18Updated 6 years ago
• computational-metabolomics / msPurity
  R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆15Updated 6 months ago
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆13Updated last year
• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆26Updated last year
• jorainer / SpectraTutorials
  These workshops and tutorials provide use cases and examples for mass spectrometry data handling and analysis using the Spectra Bioconduc…
  ☆18Updated 3 months ago
• nf-core / metaboigniter
  Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.
  ☆16Updated last month
• statisticalbiotechnology / triqler
  The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code
  ☆21Updated 4 months ago
• sneumann / mzR
  This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data…
  ☆42Updated this week