WGLab / GenGenLinks
A set of software tools to facilitate GWAS analysis
☆20Updated 2 years ago
Alternatives and similar repositories for GenGen
Users that are interested in GenGen are comparing it to the libraries listed below
Sorting:
- An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.☆39Updated 4 months ago
- R package to perform Bayesian Genome-Wide Association Studies☆41Updated 2 years ago
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆53Updated 7 years ago
- Create regional association plots from GWAS or meta-analysis☆62Updated 6 years ago
- Read PLINK BED/BIM/FAM files into R☆44Updated 4 years ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆52Updated 11 months ago
- Fuji plot—a circos representation of multiple GWAS results—☆92Updated 8 months ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆48Updated 2 years ago
- Devel repository for bsseq☆39Updated this week
- Manhattan++☆28Updated last year
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆71Updated this week
- software package for integrative genetic association analysis☆35Updated 2 years ago
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- Flexible Bayesian inference of mutational signatures☆39Updated 3 years ago
- DriverPower☆26Updated last year
- Quantitative Allele Specific Analysis of Reads. Joint genotyping & ASE inference for RNA-seq data☆27Updated 9 years ago
- Generalized linear Mixed Model Association Tests☆44Updated 2 months ago
- Functional genomics and genome-wide association studies☆69Updated 7 years ago
- ☆40Updated 8 years ago
- ☆18Updated 8 years ago
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆33Updated 8 months ago
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆72Updated last year
- ☆22Updated 2 years ago
- A Toolset for Chromosome X-Wide Association Studies☆12Updated 7 years ago
- Millefy: Genome browser-like visualization of single-cell RNA-seq dataset☆29Updated 6 years ago
- Main ricopili repo for public releases☆51Updated 10 months ago
- R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing☆62Updated 8 months ago
- Canonical SGE cluster genotype imputation pipeline☆12Updated 10 years ago
- Utility functions for FACETS☆39Updated 3 months ago
- An integrated R package to evaluate periodicity in large scale data☆31Updated 3 years ago