Alternatives and similar repositories for qurro

Users that are interested in qurro are comparing it to the libraries listed below

• biocore / BIRDMAn
  Bayesian Inferential Regression for Differential Microbiome Analysis
  ☆22Updated last year
• GenomicsAotearoa / metagenomics_summer_school
  Course materials for the Genomics Aotearoa Metagenomics Summer School, to be hosted at the University of Auckland in Septermber
  ☆64Updated last year
• biocore / DEICODE
  Robust Aitchison PCA from sparse count data
  ☆36Updated 3 years ago
• qiyunzhu / woltka
  Woltka: a versatile meta'omic data classifier
  ☆75Updated last week
• knights-lab / SHOGUN
  SHallow shOtGUN profiler
  ☆53Updated 3 years ago
• leylabmpi / endoR
  Code and manual of the endoR R-package (Ruaud et al, in preparation).
  ☆12Updated last year
• victoriapascal / gutsmash
  gutSMASH
  ☆55Updated 9 months ago
• ToniWestbrook / paladin
  Protein Alignment and Detection Interface
  ☆60Updated last year
• zhouhj1994 / LinDA
  ☆37Updated last year
• lozuponelab / SCNIC
  Sparse Cooccurence Network Investigation for Compositional data
  ☆24Updated 10 months ago
• biocore / songbird
  Vanilla regression methods for microbiome differential abundance analysis
  ☆59Updated 4 years ago
• morgannprice / PaperBLAST
  PaperBLAST: find papers about a protein or its homologs
  ☆45Updated 3 weeks ago
• arumugamlab / msamtools
  Metagenomics-related extended functionalities to samtools
  ☆21Updated 2 years ago
• functional-dark-side / agnostos-wf
  ☆45Updated 2 years ago
• HCBravoLab / metagenomeSeq
  Statistical analysis for sparse high-throughput sequencing
  ☆69Updated 9 months ago
• hildebra / lotus2
  Amplicon sequencing pipelines suitable for SSU (16S, 18S), LSU (23S, 28S) and ITS.
  ☆53Updated 3 months ago
• BradyAJohnston / plasmapR
  Creating plasmid maps inside ggplot.
  ☆89Updated 2 weeks ago
• jlw-ecoevo / gRodon
  ☆17Updated 2 years ago
• bhattlab / bhattlab_workflows
  Computational workflows for metagenomics tasks, by the Bhatt lab
  ☆47Updated 2 years ago
• leylabmpi / Struo2
  Scalable creating/updating of metagenome profiling databases
  ☆62Updated 2 months ago
• bhattlab / phanta
  Workflow to rapidly quantify taxa from all domains of life, directly from short-read human gut metagenomes
  ☆64Updated 2 months ago
• PedroMTQ / mantis
  A package to annotate protein sequences
  ☆59Updated 6 months ago
• thomazbastiaanssen / Tjazi
  A microbiome analysis toolkit for R
  ☆24Updated 2 years ago
• sherrillmix / taxonomizr
  Parse NCBI taxonomy and accessions to find taxonomic assignments
  ☆77Updated last month
• martin-steinegger / kraken-protocol
  Metagenome analysis using the Kraken software suite
  ☆33Updated 2 years ago
• snayfach / IGGdb
  Database of genomes integrated from the gut microbiome and other environments
  ☆44Updated 2 years ago
• MetaSUB / MetaSUB_CAP
  A comprehensive pipeline for short read metagenomic data
  ☆25Updated 5 years ago
• xiaoli-dong / metaerg
  ☆40Updated 4 years ago
• qiime2 / q2galaxy
  Generate Galaxy tool descriptions automatically from QIIME 2 actions.
  ☆20Updated 2 months ago
• biocore / empress
  A fast and scalable phylogenetic tree viewer for microbiome data analysis
  ☆54Updated last year