Visualize differentially ranked features (taxa, metabolites, ...) and their log-ratios across samples
☆35Apr 4, 2025Updated last year
Alternatives and similar repositories for qurro
Users that are interested in qurro are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Robust Aitchison PCA from sparse count data☆37Aug 17, 2022Updated 4 years ago
- Vanilla regression methods for microbiome differential abundance analysis☆61Nov 3, 2020Updated 5 years ago
- Neural networks for microbe-metabolite interaction analysis☆132Nov 4, 2022Updated 3 years ago
- A fast and scalable phylogenetic tree viewer for microbiome data analysis☆56Aug 4, 2024Updated 2 years ago
- ☆10Aug 31, 2018Updated 8 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- MIMIX: a Bayesian Mixed-Effects Model for Microbiome Data from Designed Experiments☆11Jul 9, 2020Updated 6 years ago
- qiime2 plugin for aldex2 for differential abundance analysis☆11Mar 5, 2020Updated 6 years ago
- QIIME2 plugin for percentile normalization to correct for batch effects in microbiome case-control studies☆10Aug 22, 2025Updated last year
- Archive: Data, scripts, and outputs for the Nat. Comm. paper "Analysis of Composition of Microbiomes with Bias Correction". Please check …☆35Oct 19, 2020Updated 6 years ago
- exploratory and interactive microbiome analyses based on heatmaps☆27Jan 27, 2025Updated last year
- Gemelli is a tool box for running Robust Aitchison PCA (RPCA), Joint Robust Aitchison PCA (Joint-RPCA), TEMPoral TEnsor Decomposition (TE…☆93Jul 13, 2026Updated 3 months ago
- Identifying misassemblies via deep learning☆11May 1, 2024Updated 2 years ago
- Phylogenetic Organization of Metagenomic Signals (POMS)☆18Dec 19, 2022Updated 3 years ago
- ☆43Oct 10, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Multinomial Logistic-Normal Models (really fast)☆20Updated this week
- The Microbiome Interpretable Temporal Rule Engine☆46May 26, 2021Updated 5 years ago
- Realtime quality control for mass spectrometry data acquisition☆22May 19, 2026Updated 5 months ago
- REference Sequence annotation and CuRatIon Pipeline☆103Updated this week
- Count Regression for Correlated Observations with the Beta-binomial☆107Nov 13, 2025Updated 11 months ago
- StrainFinder☆29Jul 8, 2018Updated 8 years ago
- Bayesian Inferential Regression for Differential Microbiome Analysis☆26Jun 5, 2026Updated 4 months ago
- QA/QC pipeline for a MiSeq/HiSeq/Ion Torrent/assembly-only run☆12Dec 2, 2024Updated last year
- Tool for recognizing genetic codes (incl. multiple genetic codes in phage genomes) and genetic-code-informed annotation of coding regions…☆11Sep 9, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Generate Galaxy tool descriptions automatically from QIIME 2 actions.☆20May 15, 2026Updated 5 months ago
- Pipeline for analyzing rare mutations in metagenome-assembled genomes☆10Apr 4, 2025Updated last year
- ATLAS - Three commands to start analyzing your metagenome data☆405May 28, 2026Updated 5 months ago
- ☆20Jun 8, 2020Updated 6 years ago
- Sample search by metadata and features☆49Aug 31, 2023Updated 3 years ago
- Sparse Cooccurence Network Investigation for Compositional data☆26Updated this week
- A comprehensive pipeline for short read metagenomic data☆25Aug 25, 2020Updated 6 years ago
- Comparative Metatranscriptomics Workflow☆10Jul 9, 2020Updated 6 years ago
- Super snazzy online phylogenetic tree viewer with automatic customization using simple, tab-separated text files.☆31Apr 10, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Microbiome research☆22May 24, 2022Updated 4 years ago
- Woltka: a versatile meta'omic data classifier☆80Sep 8, 2025Updated last year
- MetaFX – library for feature extraction from whole-genome metagenome sequencing data☆17Feb 24, 2026Updated 8 months ago
- power estimation for microbiome studies analyzed with pairwise distances and PERMANOVA☆39Nov 24, 2015Updated 10 years ago
- Engaging visualisations, made easy.☆14Aug 7, 2024Updated 2 years ago
- Phage-Host Interaction Search Tool☆33Sep 10, 2026Updated last month
- Tool for constructing phylogenies and summarizing metabolic characteristics based on curated and custom profile HMMs☆19Feb 5, 2022Updated 4 years ago