cran / TOmicsVis
This is a read-only mirror of the CRAN R package repository. TOmicsVis — Transcriptome Visualization Process Scheme. Homepage: https://benben-miao.github.io/TOmicsVis/ Report bugs for this package: https://github.com/benben-miao/TOmicsVis/issues/
☆14Updated last year
Related projects: ⓘ
- Transcriptomics Visualization R package.☆56Updated 8 months ago
- Development repository for R package 'PLSDAbatch ' hosted on Bioconductor.☆13Updated this week
- A list of alternative splicing analysis resources☆33Updated last year
- Arabidopsis RNA_-seq downstream analysis shiny app☆31Updated 5 years ago
- ☆16Updated 8 months ago
- MeRIPseqPipe:An integrated analysis pipeline for MeRIP-seq data based on Nextflow.☆31Updated 4 months ago
- Generalized Reporter Score-based Functional Enrichment Method for Omics Data☆45Updated this week
- Rapid analysis and visualisation for bulk RNA-seq, psuedo-bulk RNA-seq, GeoMx and Proteomic datasets.☆26Updated this week
- This is the supplementary code for CRC-multi-kingdom☆16Updated 2 years ago
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆24Updated 2 years ago
- My youtube programming scripts☆33Updated last week
- A versatile framework for single-cell transcriptomic data analysis in plants.☆16Updated 6 months ago
- Pipeline for Somatic Variant Calling with WES and WGS data☆20Updated 4 months ago
- A pipeline to identify pathogenic microorganisms from scRNA-seq raw data.☆26Updated last year
- circular RNA quantification tools☆27Updated 3 months ago
- optimization of ribosome P-site positioning in ribosome profiling data☆43Updated 8 months ago
- Create KEGG.db Package☆58Updated last year
- ☆20Updated 4 months ago
- MeRIP-seq analysis pipeline arranged multiple alignment tools, peakCalling tools, Merge Peaks' methods and methylation analysis methods.☆21Updated 3 years ago
- RPKM for RNASeq counts☆16Updated 3 years ago
- My own tools code for NGS data analysis (Next Generation Sequencing)☆29Updated 5 years ago
- Time-Course Multi-Omics data integration☆24Updated 5 months ago
- A script to make downloading of SRA/GEO data easier☆29Updated 11 months ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆44Updated last year
- Analysis framework for integrating gut microbiome and host gene expression data☆31Updated 2 years ago
- documentation for trackViewer☆29Updated 5 years ago
- Process m6A/MeRIP-seq data in a single or batch job mode☆19Updated 4 years ago
- A Snakemake pipeline to go from fastq mRNA sequencing files to raw and normalised counts (usable for downstream EDA and differential anal…☆12Updated last year
- Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groning…☆50Updated 3 months ago
- my first book, Biological information analysis of cancer tumors☆21Updated 2 years ago