A tiny cell atlas for commonly sequenced organisms.
☆30Jul 9, 2024Updated 2 years ago
Alternatives and similar repositories for tinyatlas
Users that are interested in tinyatlas are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Inference of differential exon usage in RNA-Seq☆10Oct 26, 2026Updated last week
- IKAP - Identifying K mAjor cell Population groups in single-cell RNA-seq analysis☆19Mar 16, 2020Updated 6 years ago
- TAD Calling using spectral clustering in R☆13Aug 21, 2026Updated 2 months ago
- ☆18May 12, 2023Updated 3 years ago
- SCISSORS builds upon the Louvain graph-based clustering in Seurat by optimizing parameter selection when reclustering cell groups, with a…☆17May 5, 2026Updated 5 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Snakemake pipeline for cellranger to process 10x single-cell RNAseq data☆16Oct 15, 2019Updated 7 years ago
- A snakemake pipeline for 10X genomics cellranger☆23Oct 13, 2025Updated last year
- Methods to compute Local Inverse Simpson's Index (LISI)☆83Sep 2, 2021Updated 5 years ago
- Gene orthologs for model organisms in a tidy data format☆16Sep 29, 2022Updated 4 years ago
- DUBStepR (Determining the Underlying Basis using Step-wise Regression) is a feature selection algorithm for cell type identification in s…☆12May 26, 2021Updated 5 years ago
- ☆17Jul 13, 2024Updated 2 years ago
- Suite for phased clusters discovery, comparison, annotation and to identify miRNA triggers - uses MapReduce model [In review]☆10Oct 9, 2021Updated 5 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆47Sep 3, 2025Updated last year
- A Shiny web app for mapping datasets using Seurat v4☆151May 22, 2026Updated 5 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- R package for integrating and comparing multiple single cell genomic datasets☆12Dec 27, 2020Updated 5 years ago
- Gossamer bioinformatics suite☆23Dec 4, 2024Updated last year
- Assign genotypes to Salmonella Paratyphi A isolates using their whole-genome data.☆10Mar 6, 2025Updated last year
- ☆21May 14, 2026Updated 5 months ago
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆30Sep 9, 2021Updated 5 years ago
- breadwallet website☆11May 21, 2015Updated 11 years ago
- BulkSignalR☆31Jun 23, 2026Updated 4 months ago
- ☆31Apr 5, 2025Updated last year
- Generate Dose-Response Curves in Python☆12Sep 15, 2026Updated last month
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆23Aug 11, 2020Updated 6 years ago
- DiffDomain is a statistically sound method for detecting differential TADs between conditions☆18Jun 27, 2025Updated last year
- Paired Replicate Analysis of Allelic Differential Splicing Events☆14Feb 21, 2023Updated 3 years ago
- ☆23Jul 27, 2023Updated 3 years ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆35Aug 16, 2021Updated 5 years ago
- a simple system for organizing your notes in plaintext files☆18Feb 7, 2022Updated 4 years ago
- Detect doublets in single-cell RNA-seq data☆185Dec 29, 2020Updated 5 years ago
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆137Oct 25, 2026Updated last week
- Clone of the Bioconductor repository for the SingleR package.☆205Sep 10, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Database for collecting and curating scientific papers related to single-cell and spatial transcriptomics sequencing.☆14Oct 5, 2025Updated last year
- Parallel execution of processes☆12Aug 17, 2025Updated last year
- Cluster-specific pseudo-bulk analysis of 10X single-cell RNA-seq data by connecting Seurat to the VBC RNA-seq pipeline.☆10Apr 7, 2020Updated 6 years ago
- R package for modeling single cell UMI expression data using regularized negative binomial regression☆272Jan 10, 2026Updated 9 months ago
- Junction centric alternative splicing translator☆22May 22, 2026Updated 5 months ago
- Python Client Package for WikiPathways☆28Sep 8, 2026Updated last month
- Gene Ontology (GO) enrichment analysis☆12Aug 7, 2023Updated 3 years ago