☆16Apr 25, 2019Updated 7 years ago
Alternatives and similar repositories for grouper
Users that are interested in grouper are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- TransAnnot - a fast transcriptome annotation pipeline☆20Jan 22, 2025Updated last year
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Oct 29, 2018Updated 7 years ago
- Software for clustering de novo assembled transcripts and counting overlapping reads☆78Feb 11, 2022Updated 4 years ago
- TD2☆38Jan 14, 2026Updated 3 months ago
- A succinct colored dBG representation☆12Sep 11, 2018Updated 7 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ZGA prokaryotic genome assembly and annotation pipeline☆13Sep 13, 2024Updated last year
- A ggplot2 layer for drawing brackets annotated with p-values and significance testing between barplot samples.☆11May 25, 2017Updated 8 years ago
- TransPi – a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly☆27Jan 2, 2022Updated 4 years ago
- R package that makes linux environment modules available from R☆11Jan 13, 2023Updated 3 years ago
- official repository for the UEA sRNA Workbench☆10May 31, 2023Updated 2 years ago
- Time-Weighted Dynamic Time Warping☆10Dec 26, 2023Updated 2 years ago
- TOGA2: A faster, more versatile successor of Tool to infer Orthologs from Genome Alignments☆34Updated this week
- Gene Ontology (GO) enrichment analysis☆12Aug 7, 2023Updated 2 years ago
- ☆57Aug 11, 2022Updated 3 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- R package to explore active transposable elements with RNA-seq data☆21Nov 25, 2022Updated 3 years ago
- Single-cell generalized trendmodel (scGTM): a flexible and interpretable model for gene expression along cell pseudotime. This is a Pyt…☆12Sep 26, 2023Updated 2 years ago
- Bayesian Deep Ensembles via MILE: easy to use, scikit-learn compatible and fast (JAX powered)☆42Apr 1, 2026Updated last month
- Materials for genome annotation sessions at the WORKSHOP ON GENOMICS, CESKY KRUMLOV☆21Jan 19, 2026Updated 3 months ago
- Manager for multi-container computing environments☆26Mar 6, 2026Updated last month
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Jun 16, 2024Updated last year
- Distribution of TEs and their relationship to genes in host genome☆24Jun 20, 2023Updated 2 years ago
- Explore the Hi-Cs☆12Nov 30, 2025Updated 5 months ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆32Dec 22, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Robust Eukaryotic Annotation Toolkit☆17Feb 28, 2025Updated last year
- ☆12Nov 12, 2025Updated 5 months ago
- Introduction to Computational Biology☆33Apr 13, 2026Updated 3 weeks ago
- ☆13Feb 14, 2023Updated 3 years ago
- Van Gogh-inspired colour palettes for R with accessibility, metadata, exports, and ggplot2 integration☆10Dec 11, 2025Updated 4 months ago
- Diagnostic functions to assess the quality of cell type annotations in single-cell RNA sequencing data☆13Jan 25, 2026Updated 3 months ago
- Improved PoV (Point of View) camera handling in Virt-A-Mate☆19Jul 23, 2020Updated 5 years ago
- Tool for finding matches to degenerate sequence motifs in FASTA files.☆13Mar 11, 2024Updated 2 years ago
- A browser based touch friendly comic book reader☆22May 17, 2018Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python deployment tool for bespoke image curation projects, oriented toward scientific projects. Please cite https://academic.oup.com/gig…☆14Aug 6, 2022Updated 3 years ago
- Software for detecting transposable element insertions from next-generation sequencing data☆11Feb 24, 2023Updated 3 years ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Jan 11, 2025Updated last year
- Tandem Repeat Annotation Library☆25Mar 30, 2023Updated 3 years ago
- convert a blast output to a bed file☆12Jun 19, 2015Updated 10 years ago
- A basic science lab framework aimed at reproducibility and lab management.☆14Mar 26, 2026Updated last month
- Nextflow Alignment Pipeline - from fastq.gz to sorted bam/cram with ease☆21Mar 19, 2026Updated last month