aritra90 / TeraPCALinks
TeraPCA is a multithreaded C++ software suite based on Intel's MKL library (or any other BLAS and/or LAPACK distribution). TeraPCA features no dependencies to external libraries and combines the robustness of subspace iteration with the power of randomization.
☆15Updated 3 years ago
Alternatives and similar repositories for TeraPCA
Users that are interested in TeraPCA are comparing it to the libraries listed below
Sorting:
- ☆11Updated 8 years ago
- Base-pair resolution detection of transcription factor binding site by deep deconvolutional network☆10Updated 8 years ago
- MuSiCa - Mutational Signatures in Cancer☆23Updated last year
- ☆15Updated 2 years ago
- ☆28Updated 6 years ago
- A framework for network analysis and display of SNPs☆19Updated 8 years ago
- Genetics training camp☆21Updated 5 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 6 years ago
- Boiler: a software tool for highly efficient, lossy compression of RNA-seq alignments☆13Updated 9 years ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Updated last year
- python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.☆16Updated 7 years ago
- We have moved to https://github.com/limix/limix.☆24Updated 8 years ago
- ☆12Updated last year
- ☆14Updated 5 years ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Updated 4 months ago
- Concise: Keras extension for regulatory genomics☆35Updated 2 years ago
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆13Updated 6 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆22Updated 3 years ago
- A Python package for gene network analysis☆32Updated 3 years ago
- ☆12Updated 6 years ago
- Directly create a bigwig file with signal derived from a sorted and indexed bam file.☆11Updated 8 years ago
- ☆21Updated 8 years ago
- This is the BWA workflow used in the PanCancer project used to allign all the BAM files.☆11Updated 2 years ago
- Predict mutated T-cell epitopes from sequencing data☆30Updated 6 months ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 6 years ago
- Simple and efficient access to genomic data for deep learning models.☆42Updated 5 years ago
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆15Updated this week
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- Hera-T, a fast and accurate tool for estimating gene abundances in single cell data generated by the 10X-Chromium protocol☆18Updated 3 years ago
- Code for the paper "A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes"☆19Updated 5 years ago