EmanuelGoncalves / crispy
Python module to analyse CRISPR-based libraries
☆13Updated 4 years ago
Alternatives and similar repositories for crispy:
Users that are interested in crispy are comparing it to the libraries listed below
- A Python package for gene network analysis☆32Updated 2 years ago
- PyIOmica (pyiomica) is a Python package for omics analyses.☆15Updated 2 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆28Updated last year
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- Proteomics label-free quantification (LFQ) analysis pipeline☆33Updated 2 months ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆25Updated last year
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆46Updated last week
- Universal RObust Peak Annotator☆15Updated last year
- ☆16Updated 2 months ago
- A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data☆20Updated 3 years ago
- ☆37Updated last year
- Bioinformatics for Benched Biologists☆22Updated 4 years ago
- Single cell proteomics data processing☆26Updated 2 weeks ago
- Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data☆14Updated 3 years ago
- A GenePattern module for running the ssGSEA method☆13Updated 3 weeks ago
- Single cell type annotation guided by cell atlases, with freedom to be queer☆25Updated 2 years ago
- ☆15Updated last year
- User-submitted RNA-seq data analysis tools for BioJupies.☆20Updated 4 years ago
- A project for exploring differentially active signaling paths related to proteomics datasets☆40Updated 5 months ago
- VDJ Clonotyping & Analysis Tools☆48Updated 3 weeks ago
- Template for building a bioconductor workshop package using github actions☆20Updated 8 months ago
- Bayesian analysis of MPRA and other high-throughput genomic assays☆10Updated 4 years ago
- Multi-omics disease sub-type specific drug repositioning aided with expression signatures from ConnectivityMap☆16Updated 5 years ago
- Absolute quantification package based on quantms.io☆13Updated last month
- Scripts supporting identification of genomic features affecting survival time in cancer☆12Updated 6 years ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- ARCHS4 RNA-seq processing scripts and web server pages.☆55Updated 4 years ago
- R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)☆24Updated 2 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 3 years ago