pamelarussell / github-bioinformaticsLinks
Code for Russell et al. "A large-scale analysis of bioinformatics code on GitHub"
☆33Updated 6 years ago
Alternatives and similar repositories for github-bioinformatics
Users that are interested in github-bioinformatics are comparing it to the libraries listed below
Sorting:
- Search across publicly available datasets to find instances where a drug or cell line of interest has been profiled.☆47Updated 7 years ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 11 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 6 years ago
- ☆19Updated 3 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 4 years ago
- Genetics training camp☆21Updated 5 years ago
- ☆28Updated 7 years ago
- iDEP: integrated Differential Expression & Pathway analysis☆14Updated 6 years ago
- MetaSRA: normalized sample-specific metadata for the Sequence Read Archive☆45Updated last month
- DEAPP shiny App☆30Updated 3 years ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆28Updated 2 years ago
- ☆13Updated 6 years ago
- Introduction to Computational Biology☆33Updated last year
- Template for building a bioconductor workshop package using github actions☆21Updated 6 months ago
- Biological Graphic tool in Python☆34Updated 5 years ago
- Bioinformatics for Benched Biologists☆22Updated 5 years ago
- EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…☆71Updated 2 years ago
- Immunology Informatics - Big Data Analysis in Immunology - Tutorials☆24Updated 8 years ago
- ☆21Updated 9 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 6 years ago
- Simple and efficient access to genomic data for deep learning models.☆42Updated 6 years ago
- Project Organization and Management for Genomics☆25Updated last week
- MuSiCa - Mutational Signatures in Cancer☆23Updated 2 years ago
- Jupyter notebooks to more effectively leverage computational resources at NCBI.☆30Updated 8 years ago
- Quick access to gene synonyms☆29Updated 2 weeks ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated 2 months ago
- ☆12Updated last year
- Load bioinformatics datasets into a local database☆11Updated 9 months ago
- IPAW: a Nextflow workflow for proteogenomics☆29Updated last year