Code for Russell et al. "A large-scale analysis of bioinformatics code on GitHub"
☆34Apr 29, 2019Updated 6 years ago
Alternatives and similar repositories for github-bioinformatics
Users that are interested in github-bioinformatics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Software to study why most genes are ignored☆15Sep 18, 2018Updated 7 years ago
- SMARTS: 'regular expressions' for chemical structures☆21Jun 21, 2018Updated 7 years ago
- CLI to automate Nextflow pipeline testing☆12Dec 15, 2025Updated 3 months ago
- Gene Expression Atlas☆21Dec 16, 2022Updated 3 years ago
- IPAW: a Nextflow workflow for proteogenomics☆29Aug 8, 2024Updated last year
- BrainSeq Phase II project lead by LIBD for the BrainSeq Consortium☆11Jan 7, 2024Updated 2 years ago
- ⛄️🎄🖥 A Holiday Theme for RStudio☆22Nov 1, 2021Updated 4 years ago
- ☆12Feb 13, 2026Updated last month
- Shiny proxy server Docker image which spins up dockerized Shiny apps in a Flexdashboard HTML wrapper☆13Apr 11, 2020Updated 5 years ago
- A software package for detection of copy number alterations from tumor samples☆12May 8, 2015Updated 10 years ago
- Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods☆18Jan 19, 2026Updated 2 months ago
- RNA mapping pipeline☆18Jun 3, 2018Updated 7 years ago
- Quantnet: SFE quantlets☆11Oct 27, 2025Updated 4 months ago
- Computational Biology Summer Program Hackathon☆13Jun 12, 2025Updated 9 months ago
- R interface to megadepth: BigWig and BAM related utilities☆13Dec 12, 2024Updated last year
- DNA kmer operations for nim☆14Apr 24, 2022Updated 3 years ago
- ☆18Oct 22, 2024Updated last year
- evaluating vcf parsing libraries☆19Mar 1, 2022Updated 4 years ago
- ☆31Aug 4, 2023Updated 2 years ago
- ☆19Jul 8, 2021Updated 4 years ago
- A process control system written in shell, for development.☆14Feb 15, 2021Updated 5 years ago
- Statistical Distributions from R☆12Apr 24, 2014Updated 11 years ago
- Complexity Based Prompting for Multi-Step Reasoning☆17Mar 10, 2023Updated 3 years ago
- ☆27Aug 29, 2025Updated 6 months ago
- Differential ATAC-seq toolkit☆28Dec 21, 2023Updated 2 years ago
- ☆12Jun 17, 2019Updated 6 years ago
- Robust and scalable inference of cell lineages via consensus clustering. Features novel algorithms for the comparison of weighted graphs …☆14Jan 16, 2017Updated 9 years ago
- CliMB: An AI-enabled Partner for Clinical Predictive Modeling☆28Dec 19, 2025Updated 3 months ago
- Client side iobio library for building and executing iobio commands☆10Dec 31, 2018Updated 7 years ago
- Services and guidelines for normalizing drug and other therapy terms☆13Feb 26, 2026Updated 3 weeks ago
- A simple (and probably ropey) Python wrapper for the ChemSpider API☆16Mar 9, 2014Updated 12 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆30Jan 6, 2021Updated 5 years ago
- Simulation tool for ChIP- and other -seq experiments☆14Mar 13, 2023Updated 3 years ago
- Information for the Intro to Cluster System Administration for Non-Sysadmins class☆10Dec 12, 2021Updated 4 years ago
- deSALT - De Bruijn graph-based Spliced Aligner for Long Transcriptome reads☆44Sep 5, 2022Updated 3 years ago
- Deep learning based prediction of pi-helices in protein sequences☆11Mar 24, 2023Updated 2 years ago
- SigProfilerSimulator allows realistic simulations of mutational patterns and mutational signatures in cancer genomes. The tool can be use…☆21Feb 10, 2026Updated last month
- a quick shiny server in a Singularity Container. For @griznog!☆19Nov 6, 2018Updated 7 years ago
- ☆17May 5, 2020Updated 5 years ago