Alternatives and similar repositories for _2022_functional-sites-cagiada

Users that are interested in _2022_functional-sites-cagiada are comparing it to the libraries listed below

• psipred / merizo_search
  Fast protein domain structure embedding+search tool
  ☆21Updated last month
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆38Updated last year
• steineggerlab / colabfold-protocol
  ColabFold protocol
  ☆52Updated 9 months ago
• JudeWells / chainsaw
  ☆41Updated 9 months ago
• SNU-CSSB / RF2-Lite
  ☆30Updated last year
• UCLOrengoGroup / cath-alphaflow
  ☆22Updated last month
• kWeissenow / MutAmore
  Rendering protein mutation movies from predicted 3D structures
  ☆20Updated last year
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆44Updated 2 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆89Updated last year
• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆45Updated 3 years ago
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆57Updated this week
• minmarg / gtalign_alpha
  GTalign, high-performance protein structure alignment, superposition and search
  ☆46Updated 2 weeks ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆55Updated 3 months ago
• clairemcwhite / vcmsa
  ☆30Updated last year
• swanss / FragFold
  Fragment binding prediction with ColabFold
  ☆35Updated 3 months ago
• maovshao / PLMAlign
  PLMAlign utilizes per-residue embeddings as input to obtain specific alignments and more refined similarity
  ☆20Updated 6 months ago
• proteinphysiologylab / frustratometeR
  ☆36Updated 3 weeks ago
• jtrinquier / SoftAlign
  ☆26Updated 2 weeks ago
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆43Updated last year
• labstructbioinf / pLM-BLAST
  Detection of remote homology by comparison of protein language model representations
  ☆54Updated 7 months ago
• steineggerlab / folddisco
  Fast indexing and search of discontinuous motifs in protein structures
  ☆52Updated this week
• seanrjohnson / esmologs
  Local homology search powered by ESM-2 language model, foldseek, hhsuite, and hmmer.
  ☆15Updated 6 months ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆28Updated last week
• wells-wood-research / de-stress
  DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.
  ☆26Updated 4 months ago
• ewbell94 / PEPPI
  Pipeline for protein-protein interaction prediction
  ☆23Updated 3 years ago
• psipred / DMPfold2
  Fast and accurate protein structure prediction
  ☆53Updated 6 months ago
• ThomasCMcLean / LazyAF
  Code for LazyAF pipeline
  ☆20Updated last year
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆46Updated 2 months ago
• tymor22 / protein-vec
  Repository for Protein-Vec, a protein embedding mixture of experts model
  ☆38Updated last year
• vttresearch / ActSeek
  Protein discovery tool for mining in the Alphafold database based on the position of few amino acids.
  ☆22Updated last month