Gonglab-THU / GeoStab
☆17Updated 3 weeks ago
Related projects ⓘ
Alternatives and complementary repositories for GeoStab
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆26Updated this week
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆32Updated 2 months ago
- ☆14Updated 5 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆29Updated last year
- ☆23Updated 3 weeks ago
- Generative diverse protein backbones by protein language model☆24Updated 3 months ago
- ☆19Updated 2 years ago
- ☆20Updated last month
- ML-optimized library design with improved fitness and diversity for protein engineering☆23Updated 3 months ago
- scripts to find PBD structures for cancer driver proteins☆29Updated 8 months ago
- PackDock: a Diffusion Based Side Chain Packing Model for Flexible Protein-Ligand Docking☆29Updated last month
- DyNoPy☆10Updated 2 months ago
- ☆23Updated 3 weeks ago
- ☆24Updated 3 months ago
- Some scripts that I keep using over and over.☆18Updated 7 months ago
- code for SeqDance, a biophysics-informed protein language model☆17Updated 3 weeks ago
- Protein Sequence Evolutionary Information Language Model☆12Updated last year
- Code for deep learning guided design of dynamic proteins☆16Updated 3 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆25Updated last month
- ☆38Updated 7 months ago
- bakerlab pymol scripts☆9Updated 4 years ago
- ☆11Updated 3 weeks ago
- SurfDock is a Surface-Informed Diffusion Generative Model for Reliable and Accurate Protein-ligand Complex Prediction☆49Updated 2 weeks ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆24Updated this week
- Structure-Informed Protein Language Model☆26Updated 8 months ago
- Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"☆11Updated this week
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 3 years ago
- Code for humanization of antibody and nanobody☆22Updated 2 weeks ago
- Binding pocket optimization based on force fields and docking scoring functions☆29Updated last week