The official code repository of "OmniESI: A unified framework for enzyme-substrate interaction prediction with progressive conditional deep learning"
☆32Aug 26, 2025Updated 11 months ago
Alternatives and similar repositories for OmniESI
Users that are interested in OmniESI are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆19Jan 8, 2025Updated last year
- ☆33Oct 10, 2025Updated 10 months ago
- A generalized enzyme kinetics parameter prediction model.☆96Oct 2, 2025Updated 10 months ago
- ☆27Jun 18, 2026Updated last month
- A predictor of enzyme optimal temperature☆18Mar 13, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆36Oct 27, 2025Updated 9 months ago
- ☆83Aug 26, 2025Updated 11 months ago
- ☆15Feb 18, 2025Updated last year
- A geometric foundation model for enzyme retrieval with evolutionary insights.☆98Jul 29, 2026Updated last week
- Machine Learning models for in vitro enzyme kinetic parameter prediction☆95Jun 15, 2026Updated last month
- a universal molecular interaction modeling platform based on AlphaFold3, supporting structure prediction and analysis for various recepto…☆49Nov 20, 2025Updated 8 months ago
- The gmx_rrcs script is designed to calculate the residues-residues contact scores (rrcs) from a trajectory file generated by GROMACS.☆18Jun 16, 2025Updated last year
- ESMDynamic repo☆25Jun 26, 2026Updated last month
- Complete saturation mutagenesis of a protein using ESM☆19Feb 20, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Official open-source of CarbonNovo: Joint Design of Protein Structure and Sequence Using a Unified Energy-based Model☆26Nov 18, 2024Updated last year
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆261Nov 5, 2025Updated 9 months ago
- ☆40Jun 17, 2025Updated last year
- Potts model-based protein sequence design☆110Jul 1, 2026Updated last month
- ☆118Jan 3, 2026Updated 7 months ago
- Fast and Interpretable Protein Substructure Alignment via Optimal Transport (ICLR 2026)☆27Jun 26, 2026Updated last month
- Protein solubility prediction tools☆24Dec 13, 2024Updated last year
- Source code of Venus-MAXWELL: Efficient Learning of Protein-Mutation Stability Landscapes using Protein Language Models☆27Jun 3, 2025Updated last year
- ☆19Sep 9, 2025Updated 11 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- EnzyHTP is a python library that automates the complete life-cycle of enzyme modeling☆37Jul 31, 2026Updated last week
- ☆82Sep 12, 2024Updated last year
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆148Jul 10, 2026Updated last month
- Machine learning prediction of enzyme optimum pH☆56Apr 29, 2025Updated last year
- Benchmarking scripts for Gaia☆17Apr 10, 2025Updated last year
- ☆18Jun 22, 2025Updated last year
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆97Jul 31, 2026Updated last week
- ☆73Apr 8, 2025Updated last year
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆135Jan 28, 2026Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆16Sep 9, 2024Updated last year
- ☆25Sep 21, 2023Updated 2 years ago
- DynamiSpectra: Decode molecular motion with precision and power☆23Sep 16, 2025Updated 10 months ago
- Energy-guided binder design pipeline built on BindCraft☆18Jun 6, 2025Updated last year
- A deep learning framework for deubiquitnase-substrate interaction identification☆13Jul 31, 2025Updated last year
- Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"☆48Aug 5, 2025Updated last year
- ☆26Apr 2, 2024Updated 2 years ago