BIA Bob is a Jupyter+LLM-based assistant for interacting with image data and for working on Bio-image Analysis tasks.
☆132Aug 7, 2025Updated 10 months ago
Alternatives and similar repositories for bia-bob
Users that are interested in bia-bob are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Imagej toolset to ease hyperstacks visualization and handling☆23Feb 9, 2026Updated 3 months ago
- Interactive image stack viewing in jupyter notebooks based on ipycanvas and ipywidgets☆181Jan 17, 2026Updated 4 months ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Sep 26, 2024Updated last year
- Denoising via adaptive binning.☆13Jan 6, 2026Updated 5 months ago
- An ImageJ/Fiji plugin designed to effortlessly integrate Segment-Anything models (SAMs) without code.☆92Mar 24, 2026Updated 2 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Accelerated Pixel and Object Classifiers (APOC)☆62Apr 24, 2026Updated last month
- git-bob uses AI to solve Github-issues. It runs inside the Github CI, no need to install anything on your computer.☆68May 30, 2026Updated last week
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆31May 28, 2026Updated last week
- A napari plugin for making image annotation using feature space of vision transformers and Random Forest classifier☆23Nov 24, 2025Updated 6 months ago
- An R package to detect collective spatio-temporal phenomena☆13Sep 25, 2025Updated 8 months ago
- GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data☆243Apr 24, 2026Updated last month
- Time arrow prediction for live-cell microscopy☆22Jun 17, 2024Updated last year
- Cell tracking and segmentation software☆177Updated this week
- A platform for compiling, analyzing, and exploring tracking data☆50Feb 2, 2026Updated 4 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆46May 1, 2025Updated last year
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆27Sep 26, 2024Updated last year
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Dec 9, 2025Updated 5 months ago
- Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more☆157Jan 11, 2026Updated 4 months ago
- ilastik plugin for napari☆15Mar 2, 2026Updated 3 months ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Jun 5, 2024Updated 2 years ago
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆86Mar 28, 2026Updated 2 months ago
- ☆225Feb 4, 2026Updated 4 months ago
- Segment Anything for Microscopy☆687Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A napari plugin to process and analyse images with chatGPT!☆296Feb 14, 2026Updated 3 months ago
- ☆52May 1, 2025Updated last year
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆39Jul 9, 2024Updated last year
- ☆24May 16, 2023Updated 3 years ago
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆10Dec 17, 2021Updated 4 years ago
- QuPath extension for Cellsparse☆19May 6, 2025Updated last year
- ☆44May 31, 2026Updated last week
- A self-explanatory, hands-on intro to bioimage analysis in python. Slightly outdated but still much liked by learners.☆99Feb 17, 2023Updated 3 years ago
- SciCount is tool focused on counting and classifying of objects in image-like data and scientific images, with training and example datas…☆11Oct 24, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A minimal dependency napari plugin giving access to scikit-image functions☆23Mar 26, 2026Updated 2 months ago
- Track and lineage visualization with btrack and Napari☆45Sep 29, 2025Updated 8 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Apr 20, 2026Updated last month
- A collection of Python Jupyter Notebooks with Generative Artificial Intelligence related contents☆17Nov 10, 2025Updated 6 months ago
- Loading and handling microscopy data in blender☆152May 27, 2026Updated last week
- ☆23Mar 26, 2021Updated 5 years ago
- Linking napari layers with Matplotlib plots☆43Jun 2, 2026Updated last week