OakesLab / AFT-Alignment_by_Fourier_TransformLinks
☆16Updated last year
Alternatives and similar repositories for AFT-Alignment_by_Fourier_Transform
Users that are interested in AFT-Alignment_by_Fourier_Transform are comparing it to the libraries listed below
Sorting:
- Guides and code for 3D nuclear instance segmentation☆22Updated last week
- Imagej toolset to ease hyperstacks visualization and handling☆23Updated last year
- ☆51Updated 7 months ago
- A napari plugin for clustering objects according to their properties.☆87Updated last week
- A module with convenience functions for writing Python code that interacts with OMERO.☆46Updated last week
- A platform for compiling, analyzing, and exploring tracking data☆47Updated 3 months ago
- StarDist plugin for ImageJ☆30Updated 3 years ago
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆39Updated last week
- Track and lineage visualization with btrack and Napari☆45Updated 2 months ago
- ☆13Updated 2 weeks ago
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆82Updated 2 weeks ago
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆18Updated 2 months ago
- Generate consensus 3D cells segmentations by combining 2D cell segmentations from any combination of xy, xz, yz views, compatible with ou…☆43Updated 2 weeks ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 4 years ago
- Accurate and efficient spot detection for microscopy data☆111Updated last week
- ☆12Updated last year
- Multiple file format reading directly into napari using pure Python☆39Updated last month
- This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…☆135Updated 5 years ago
- ☆13Updated 8 months ago
- Deconvolution of widefield microscopy images and generation of point spread functions☆55Updated last week
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆34Updated 2 months ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆17Updated 2 weeks ago
- Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, U…☆12Updated 3 years ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30Updated 7 months ago
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆20Updated 2 years ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆61Updated last year
- ☆36Updated last year
- EASI-FISH analysis pipeline for spatial transcriptomics☆35Updated last year
- SplineDist: Automated Cell Segmentation with Spline Curves☆69Updated last year
- Lectures for a napari training course☆51Updated 2 years ago