OakesLab / AFT-Alignment_by_Fourier_TransformLinks
☆16Updated last year
Alternatives and similar repositories for AFT-Alignment_by_Fourier_Transform
Users that are interested in AFT-Alignment_by_Fourier_Transform are comparing it to the libraries listed below
Sorting:
- A module with convenience functions for writing Python code that interacts with OMERO.☆46Updated last month
- ☆51Updated 8 months ago
- A platform for compiling, analyzing, and exploring tracking data☆47Updated 4 months ago
- Imagej toolset to ease hyperstacks visualization and handling☆23Updated last year
- Guides and code for 3D nuclear instance segmentation☆22Updated last month
- Track and lineage visualization with btrack and Napari☆45Updated 3 months ago
- A napari plugin for clustering objects according to their properties.☆88Updated this week
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆83Updated last month
- Multiple file format reading directly into napari using pure Python☆39Updated 3 months ago
- ☆12Updated last year
- ☆13Updated last month
- Generate consensus 3D cells segmentations by combining 2D cell segmentations from any combination of xy, xz, yz views, compatible with ou…☆51Updated last month
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆40Updated last month
- Accurate and efficient spot detection for microscopy data☆114Updated last week
- Lectures for a napari training course☆50Updated 2 years ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆70Updated last year
- Feature extraction for labeled objects in images using regionprops from scikit-image☆55Updated 8 months ago
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆18Updated 3 months ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 4 years ago
- StarDist plugin for napari☆38Updated last year
- Generate markdown notebooks from ImageJ Macro☆26Updated 4 years ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆25Updated 2 months ago
- EASI-FISH analysis pipeline for spatial transcriptomics☆35Updated last year
- This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…☆136Updated 5 years ago
- ☆25Updated 2 years ago
- some useful function to get Label from ROIs and vice versa , and more!☆11Updated 2 years ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 8 months ago
- ☆36Updated last year
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30Updated 8 months ago
- Deconvolution of widefield microscopy images and generation of point spread functions☆58Updated last week