OakesLab / AFT-Alignment_by_Fourier_TransformLinks
☆16Updated last year
Alternatives and similar repositories for AFT-Alignment_by_Fourier_Transform
Users that are interested in AFT-Alignment_by_Fourier_Transform are comparing it to the libraries listed below
Sorting:
- Guides and code for 3D nuclear instance segmentation☆22Updated 4 months ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆45Updated last week
- A napari plugin for clustering objects according to their properties.☆88Updated last week
- ☆51Updated 6 months ago
- A platform for compiling, analyzing, and exploring tracking data☆47Updated 2 months ago
- Track and lineage visualization with btrack and Napari☆46Updated last month
- EASI-FISH analysis pipeline for spatial transcriptomics☆35Updated last year
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆39Updated 2 weeks ago
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆82Updated this week
- Accurate and efficient spot detection for microscopy data☆108Updated last month
- ☆12Updated last year
- Lectures for a napari training course☆51Updated 2 years ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆69Updated last year
- Multiple file format reading directly into napari using pure Python☆39Updated last month
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 4 years ago
- StarDist plugin for ImageJ☆30Updated 3 years ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆60Updated last year
- Imagej toolset to ease hyperstacks visualization and handling☆23Updated last year
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆18Updated last month
- This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…☆135Updated 5 years ago
- ☆13Updated last month
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 6 months ago
- ☆36Updated last year
- ☆89Updated 2 weeks ago
- Generate consensus 3D cells segmentations by combining 2D cell segmentations from any combination of xy, xz, yz views, compatible with ou…☆30Updated last week
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy☆85Updated 7 months ago
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆88Updated last week
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆20Updated 2 years ago
- StarDist plugin for napari☆39Updated last year