OakesLab / AFT-Alignment_by_Fourier_Transform
☆16Updated 9 months ago
Alternatives and similar repositories for AFT-Alignment_by_Fourier_Transform
Users that are interested in AFT-Alignment_by_Fourier_Transform are comparing it to the libraries listed below
Sorting:
- Guides and code for 3D nuclear instance segmentation☆22Updated 2 weeks ago
- Imagej toolset to ease hyperstacks visualization and handling☆22Updated 7 months ago
- A platform for compiling, analyzing, and exploring tracking data☆44Updated 2 months ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆44Updated last week
- ☆49Updated 2 weeks ago
- ☆12Updated last year
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated 7 months ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 3 years ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated last week
- Multiple file format reading directly into napari using pure Python☆36Updated 9 months ago
- NEUBIAS Academy @Home: Interactive Bioimage Analysis with Python and Jupyter☆62Updated last year
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 2 months ago
- Interactive visualization and sharing of cell tracking data in the browser☆26Updated this week
- Browse your OMERO database from within napari.☆37Updated this week
- StarDist plugin for ImageJ☆29Updated 3 years ago
- ☆11Updated last month
- EASI-FISH analysis pipeline for spatial transcriptomics☆34Updated 5 months ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- Automated mitochondrial segmentation and tracking.☆31Updated 3 years ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated last month
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 5 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆26Updated 2 weeks ago
- "Defragmentation: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: workflow…☆15Updated 2 years ago
- Track and lineage visualization with btrack and Napari☆45Updated 6 months ago
- StarDist plugin for napari☆38Updated 8 months ago
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆37Updated 2 months ago
- Lectures for a napari training course☆50Updated last year
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆26Updated 11 months ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆16Updated 2 weeks ago