imagej / example-imagej2-command
Simple Maven project for an ImageJ2 command
☆30Updated 2 years ago
Alternatives and similar repositories for example-imagej2-command:
Users that are interested in example-imagej2-command are comparing it to the libraries listed below
- Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ☆24Updated 2 years ago
- Generate markdown notebooks from ImageJ Macro☆23Updated 3 years ago
- ☆19Updated last month
- A collection of demonstration materials for MorphoLibJ.☆12Updated 2 years ago
- StarDist plugin for ImageJ☆27Updated 2 years ago
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆35Updated last year
- CLIJ is deprecated. Visit CLIJ2☆56Updated 3 years ago
- ImgLib2/BDV implementation of Stitching for large datasets☆69Updated 2 months ago
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Updated 7 years ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated last year
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆33Updated 3 weeks ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆28Updated last week
- Helpers to use BigDataViewer as a quick visualization tool in other projects.☆25Updated 7 months ago
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆24Updated 3 months ago
- Fiji plugins for starting BigDataViewer and exporting data.☆21Updated 3 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated last month
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆15Updated last month
- Z-stack Depth Colorcode ImageJ FIJI plugin☆23Updated 3 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆53Updated 2 years ago
- Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, U…☆12Updated 2 years ago
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Updated last year
- python tools for BigDataViewer☆21Updated 2 weeks ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 4 months ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆61Updated last month
- Little OBjects Segmentation and Tracking EnviRonment☆9Updated 4 years ago
- ☆19Updated 3 years ago
- A tool for manual pointwise deformable registration using bigdataviewer.☆27Updated last week
- GPU-accelerated image processing for everyone☆50Updated 6 months ago
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆9Updated 3 years ago
- The ImageJ wiki☆27Updated this week