Zhong-Lab-UCSD / Genomic-Interactive-Visualization-EngineLinks
Genomic Interactive Visualization Engine
☆146Updated 3 years ago
Alternatives and similar repositories for Genomic-Interactive-Visualization-Engine
Users that are interested in Genomic-Interactive-Visualization-Engine are comparing it to the libraries listed below
Sorting:
- Tip and tricks for BAM files☆86Updated 7 years ago
- csf fork of fastqc for usage on selected reads of unaligned bam file☆48Updated 12 years ago
- 10x Genomics Linked-Read Diploid De Novo Assembler☆65Updated 7 years ago
- Relevant papers for CNV and SV approaches☆94Updated last year
- FEELnc : FlExible Extraction of LncRNA☆93Updated 6 months ago
- A tool for bigWig files.☆118Updated 7 years ago
- Materials for Spring 2018 Applied Genomics Course☆79Updated 7 years ago
- phasing and Allele Specific Expression from RNA-seq☆117Updated last year
- BAM Statistics, Feature Counting and Annotation☆151Updated 2 weeks ago
- A Nextflow-based pipeline for comprehensive analyses of long non-coding RNAs from RNA-seq datasets☆84Updated 3 years ago
- Intervene: a tool for intersection and visualization of multiple genomic region and gene sets☆143Updated 2 years ago
- Tools for analyzing DNA methylation data☆44Updated 3 weeks ago
- This repo has been archived, these workflows are still available in the GATK repository under the scripts directory. The workflows are al…☆78Updated 5 years ago
- RNA-Seq analysis workflow☆105Updated 4 years ago
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆50Updated 5 years ago
- Learning the Variant Call Format☆148Updated 6 months ago
- Software for predicting library complexity and genome coverage in high-throughput sequencing.☆94Updated last month
- Unsorted scripts for bioinformatics☆61Updated 4 years ago
- fast and accurate alignment of BS-Seq reads using bwa-mem and a 3-letter genome☆159Updated 6 months ago
- An NGS read trimming tool that is specific, sensitive, and speedy. (production)☆126Updated 9 months ago
- Match up paired end fastq files quickly and efficiently.☆153Updated last year
- Precision HLA typing from next-generation sequencing data☆78Updated this week
- Issue tracker for the Biostar Handbook☆64Updated 3 years ago
- Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.☆51Updated 7 years ago
- Automatically exported from code.google.com/p/ea-utils☆96Updated 2 years ago
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆124Updated this week
- Lima - Demultiplex Barcoded PacBio Samples☆68Updated 9 months ago
- Next-Generation Sequencing(NGS) toolkits.☆48Updated 9 years ago
- ☆50Updated 4 years ago
- Snakefiles for common RNA-seq data analysis workflows (STAR and Kallisto).☆94Updated 8 years ago