ExpressionAnalysis / ea-utilsLinks
Automatically exported from code.google.com/p/ea-utils
☆96Updated 2 years ago
Alternatives and similar repositories for ea-utils
Users that are interested in ea-utils are comparing it to the libraries listed below
Sorting:
- FEELnc : FlExible Extraction of LncRNA☆93Updated 5 months ago
- Lima - Demultiplex Barcoded PacBio Samples☆67Updated 8 months ago
- BAM Statistics, Feature Counting and Annotation☆152Updated last month
- Software for clustering de novo assembled transcripts and counting overlapping reads☆76Updated 3 years ago
- phasing and Allele Specific Expression from RNA-seq☆117Updated last year
- Genomic Interactive Visualization Engine☆146Updated 3 years ago
- Snakemake pipelines for nanopore sequencing data archiving and processing☆91Updated 3 years ago
- Tip and tricks for BAM files☆86Updated 7 years ago
- materials for the RNA-Seq workshop on Trinity and Tuxedo, covering de novo and genome-guided transcript assembly and downstream analysis.☆48Updated 9 years ago
- Tool for stripping adaptors and/or merging paired reads with overlap into single reads.☆145Updated 9 years ago
- Software for predicting library complexity and genome coverage in high-throughput sequencing.☆91Updated 3 weeks ago
- Finder of Somatic Fusion Genes in RNA-seq data☆148Updated 4 months ago
- The DevNet project on github stores the PacBio DevNet website.☆116Updated 7 years ago
- Variant Calling Pipeline Using GATK4 and Nextflow☆58Updated 2 years ago
- Very simple, pure python, BAM file reader☆79Updated 6 years ago
- 10x Genomics Linked-Read Diploid De Novo Assembler☆65Updated 7 years ago
- Match up paired end fastq files quickly and efficiently.☆153Updated last year
- AdapterRemoval v2 - rapid adapter trimming, identification, and read merging☆113Updated this week
- Biopieces is a bioinformatic framework of tools easily used and easily created.☆144Updated 7 years ago
- fast and accurate alignment of BS-Seq reads using bwa-mem and a 3-letter genome☆157Updated 5 months ago
- web documentation for Trinotate☆48Updated 2 years ago
- A fast Python and command-line utility for extracting simple statistics against genome positions based on sequence alignments from a SAM …☆195Updated 2 weeks ago
- ☆122Updated 5 months ago
- Analysis pipeline for the GUIDE-seq assay.☆81Updated 2 years ago
- GATK RNA-Seq Variant Calling in Nextflow☆137Updated 3 years ago
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆51Updated 5 years ago
- Sequana: a set of Snakemake NGS pipelines☆151Updated 2 months ago
- Platypus Variant Caller☆108Updated last year
- A tool to identify, orient, trim and rescue full length cDNA reads☆83Updated 3 years ago
- ShortStack: Comprehensive annotation and quantification of small RNA genes☆97Updated 2 months ago