My bioinfo toolbox
☆50Feb 6, 2025Updated last year
Alternatives and similar repositories for bin
Users that are interested in bin are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago
- A stand-alone application for constructing websites for visualizing and browsing synteny blocks☆18May 30, 2026Updated last week
- Plot allele frequencies in VCF files☆11Apr 13, 2026Updated last month
- Assemble and following pipeline used in wisent genome paper.☆17Dec 23, 2016Updated 9 years ago
- CLfinder-OrthNet, a pipeline to encode orthologs from multiple genomes and their evolutionary history into networks (OrthNets) based on c…☆10Jun 9, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Killifish genomics scripts☆12Feb 19, 2021Updated 5 years ago
- GCEN: an easy-to-use toolkit for Gene Co-Expression Network analysis and lncRNAs annotation☆22Mar 26, 2022Updated 4 years ago
- A place to put docker build files☆14Oct 3, 2023Updated 2 years ago
- Transcripts annotation and GO enrichment Fisher tests☆27Apr 28, 2023Updated 3 years ago
- Whole Genome Annotation Pipeline☆16Jun 20, 2025Updated 11 months ago
- An R package to visualize chromosome scale repeat patterns and predict centromere locations.☆47May 8, 2026Updated last month
- Some useful gadgets☆12Mar 14, 2022Updated 4 years ago
- ☆13Nov 15, 2017Updated 8 years ago
- ☆11Jul 4, 2022Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆20Mar 11, 2024Updated 2 years ago
- RPKM for RNASeq counts☆16Oct 24, 2020Updated 5 years ago
- Instruction and scripts for reconstructing ancestral genome from pairwise syntenic blocks using MLGO☆13Oct 30, 2018Updated 7 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56May 5, 2026Updated last month
- toolkit to process gtf files☆17Dec 24, 2021Updated 4 years ago
- Annotate Olfactory receptor CDS from genome☆11Apr 29, 2023Updated 3 years ago
- Custom scripts for monotreme genome project☆19Jan 12, 2021Updated 5 years ago
- Invertory of TE-gene isoforms☆14Sep 18, 2023Updated 2 years ago
- Scripts for Shi et al. (2024). The suer-pangenome of Populus unveils genomic facets for its adaptation and diversification in widespread …☆18Apr 1, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆17Oct 21, 2024Updated last year
- An m6A-aware basecalling model to detect m6A modifications at single nucleotide resolution in individual reads (Cruciani, Delgado-Tejedo…☆18Sep 1, 2025Updated 9 months ago
- A tool for fetching nanopore fast5 files after filtering via demultiplexing, alignment, or other, to improve downstream processing effici…☆13Feb 13, 2019Updated 7 years ago
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆19Mar 26, 2023Updated 3 years ago
- Scripts of population genomics analysis☆36May 8, 2018Updated 8 years ago
- A toolkit for NGS analysis with Python☆14Jan 18, 2023Updated 3 years ago
- Pipelines for NGS, imputation, gwas, ...☆30Dec 18, 2019Updated 6 years ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆34Sep 11, 2025Updated 8 months ago
- myVCF: a web-based platform for target and exome mutations data management☆21Apr 13, 2021Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Simple pipeline to go from an alignment to a neutral model, using the PHAST toolkit☆11Jan 17, 2020Updated 6 years ago
- A comprehensive pipeline for Ribo-seq data analysis☆11Jun 27, 2025Updated 11 months ago
- ☆24Dec 10, 2018Updated 7 years ago
- De-novo Assembly Structural Variant Caller☆13Sep 15, 2016Updated 9 years ago
- From the comparison of two extant genomes and corresponding gene families, PhylDiag detects conserved segments, i.e. segments of chromoso…☆15Aug 7, 2023Updated 2 years ago
- PhyloForge: Unifying micro and macro evolution with comprehensive genomic signals☆10May 17, 2024Updated 2 years ago
- A long-read SV calling pipeline☆12Aug 13, 2021Updated 4 years ago