A Rust wrapper around the Entrez API. Helps you access the Entrez API using idiomatic Rust. It also provides tools to parse the XML results from Entrez.
☆20Dec 8, 2022Updated 3 years ago
Alternatives and similar repositories for entrez-rs
Users that are interested in entrez-rs are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Singular Genomics Demultiplexing Tool☆16Mar 5, 2024Updated 2 years ago
- Low level bindings and wrapper for slow5lib, an alternative for ONT Nanopore sequencing FAST5 output☆10Nov 5, 2024Updated last year
- A "Navie" Implementation of the Wavefront Algorithm For Sequence Alignment with Gap-Affine Scoring☆14May 29, 2026Updated last month
- SIMD-parallel BLAST X-drop DP on sequence graphs☆24May 30, 2024Updated 2 years ago
- ☆15Apr 19, 2018Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Header-only, gzread-like reader for gzip, bz2, and xz.☆11Aug 8, 2018Updated 7 years ago
- Cython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation.☆24Updated this week
- ☆16Jan 28, 2026Updated 5 months ago
- A collection of plots for long read sequencing FastQ files from devices like Oxford Nanopore's MinION and PromethION.☆12Feb 14, 2023Updated 3 years ago
- open source high throughput homogeneous liquid handler ( automated pipette )☆17Sep 20, 2011Updated 14 years ago
- Enhanced Artificial Genome Engine: next generation sequencing reads simulator☆33May 20, 2020Updated 6 years ago
- ☆32Dec 16, 2022Updated 3 years ago
- Download NCBI assembly genomes with ftp. rsync, ascp☆12Aug 2, 2022Updated 3 years ago
- autoprot provides standardised, fast, and reliable proteomics data analysis while ensuring a high customisability needed to tailor the an…☆12Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A set of scripts for the assembly of chloroplast genomes out of whole-genome sequencing reads☆12May 2, 2019Updated 7 years ago
- Nextflow-powered MS-DIAL☆14May 30, 2026Updated last month
- Identifying ViRal and Circular content in metAgenomes☆14Dec 13, 2018Updated 7 years ago
- Ampseer examines reads in fastq format and identifies which multiplex PCR primer set was used to generate the SARS-CoV-2 sequencing libra…☆15Feb 27, 2024Updated 2 years ago
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆16Updated this week
- Optimal sequence-to-graph alignment with recombinations☆41Apr 28, 2026Updated 2 months ago
- protocols for bioinformatics data analysis☆10Sep 22, 2020Updated 5 years ago
- ☆22Jan 3, 2025Updated last year
- Nim Library for sequence (protein/nucleotide) bioinformatics☆22Aug 24, 2020Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- FASTA and FASTQ parsing in Rust☆86Mar 14, 2025Updated last year
- A Modern Perl Framework for High Throughput Sequencing analysis☆17May 6, 2020Updated 6 years ago
- Efficient querying of biological databases☆44Oct 27, 2025Updated 8 months ago
- Indels are not ideal - quick test for interrupted ORFs in bacterial/microbial genomes☆15Jun 26, 2018Updated 8 years ago
- Index kmtricks bf matrices☆49Jul 6, 2026Updated 2 weeks ago
- ☆36Nov 20, 2023Updated 2 years ago
- Rust bindings for the tskit library☆18Jul 1, 2026Updated 3 weeks ago
- Self-contained, multi-threaded fasta/q parser☆50Mar 10, 2026Updated 4 months ago
- ☆10Dec 4, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Bit-packed and well-typed biological sequences☆46May 17, 2026Updated 2 months ago
- Generates Freedom EVOware scripts for the Freedom EVO universal pipetting robot from TECAN. It provides new layers of abstraction to offe…☆30May 31, 2020Updated 6 years ago
- An optimal space run-length Burrows-Wheeler transform full-text index☆27Oct 28, 2021Updated 4 years ago
- A talk on Makesfiles in bioinformatics☆26Jul 18, 2013Updated 13 years ago
- A C++11 command line parser☆14Feb 26, 2017Updated 9 years ago
- Introduction to Ancient Metagenomics Book☆16Jul 8, 2026Updated 2 weeks ago
- Chinese Room Abstract Stack Machine C++ Data Driven Agentic App framework, ASCII Data Spec, SCRIPT Spec, Monoid AI research and Puff, Wor…☆13Apr 20, 2026Updated 3 months ago