VCG / compressoLinks
Compresso: Efficient Compression of Segmentation Data For Connectomics
☆12Updated 4 years ago
Alternatives and similar repositories for compresso
Users that are interested in compresso are comparing it to the libraries listed below
Sorting:
- Block-wise task scheduling for large nD volumes.☆32Updated 8 months ago
- Connecting Java/ImgLib2 + Python/NumPy☆30Updated 4 months ago
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆26Updated 3 weeks ago
- ☆13Updated last month
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆63Updated 2 months ago
- WebGL-based viewer for volumetric data☆24Updated last week
- ClearVolume is a real-time live 3D visualization library designed for high-end volumetric microscopes such as SPIM and DLSM microscopes. …☆46Updated 9 months ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆62Updated last week
- Python SDK for interacting with the BossDB REST API☆22Updated 7 months ago
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Updated 8 years ago
- Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation☆54Updated 5 months ago
- Create 3D/4D animations using a natural language-based syntax☆61Updated 6 months ago
- Read and write Neuroglancer datasets programmatically.☆167Updated 2 weeks ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 4 years ago
- a free, open-source web app for annotating, training, and evaluating image understanding algorithms☆25Updated 4 years ago
- A library to facilitate machine learning on multi-dimensional images.☆86Updated last week
- Online documentation and reference for CLIJ☆28Updated 4 years ago
- High quality visualization for volumetric image data☆53Updated last week
- Napari gaming☆17Updated 3 years ago
- jupyter notebook extension to visualize numpy arrays with the neuroglancer☆28Updated 7 years ago
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆17Updated 3 weeks ago
- website for the napari image viewer☆47Updated this week
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- Python module for registering and fusing multi-view microscopy data☆24Updated 9 months ago
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆43Updated 4 months ago
- 3D/4D volumetric rendering of microscopy data☆26Updated last month
- Resources for teaching/preparing to teach bioimage analysis☆58Updated 2 weeks ago
- PyKNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for high-throughput image annotation…☆18Updated 5 years ago
- ☆49Updated 3 weeks ago
- Python based viewer for large mulit-dimensional datasets.☆20Updated 5 years ago