Reconstruction of watertight meshes, annotated volumes and center line skeletons of neuroscience spatial structures from non-watertight inputs, segmented masks, skeletons of NGV morphologies and volumes.
☆36Jan 3, 2025Updated last year
Alternatives and similar repositories for Ultraliser
Users that are interested in Ultraliser are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Multiplatform 3D numpy image browser based viewer with voxel painting.☆16Apr 21, 2026Updated last month
- A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing vasculature (or blood vessels…☆49Dec 19, 2023Updated 2 years ago
- Converter for NEURON simulator HOC files to SWC☆12Jul 20, 2020Updated 5 years ago
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆27Updated this week
- Serialize dict of integers to bytes and read with near zero parsing. Specialization for int to int.☆10Mar 6, 2026Updated 3 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- PyNeval, a toolbox for quantative analysis on neuron reconstruction result.☆17Nov 18, 2021Updated 4 years ago
- ☆12Updated this week
- Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data☆26Updated this week
- Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing, Hole Filling.☆19Apr 18, 2026Updated last month
- Mesh generation from sparse matrices☆23Nov 5, 2025Updated 7 months ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆68May 27, 2026Updated last week
- A python package for the topological analysis of neurons.☆28Feb 26, 2025Updated last year
- Your favorite Python graph libraries, scalable and interoperable. Graph databases in memory, and familiar graph APIs for cloud databases.☆114Mar 20, 2026Updated 2 months ago
- Command line tool for registration of very large 3D volumes.☆16Jan 28, 2026Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Code for MedIA 2024 paper "Generative modeling of living cells with SO(3)-equivariant implicit neural representations" and MICCAI 2022 pa…☆14Oct 16, 2023Updated 2 years ago
- PyTorch Implementation of Global Neuron Shape Reasoning with Point Affinity Transformers☆14Mar 16, 2026Updated 2 months ago
- A PyTorch add-on for working with image mappings and displacement fields, including Spatial Transformers☆52Feb 15, 2022Updated 4 years ago
- Public release repository for STochastic Engine for Pathway Simulation (STEPS)☆43Mar 30, 2026Updated 2 months ago
- A Lightweight Multi-modality Image Segmentation Network via Domain Adaptation using Gradient Magnitude and Shape Constraint☆10Apr 3, 2023Updated 3 years ago
- Calculation of euclidean distance between vectors, with SIMD☆13Jan 17, 2024Updated 2 years ago
- A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing digital reconstructions of ne…☆137Oct 29, 2025Updated 7 months ago
- A fast, lightweight 3D viewer for Python based on WGPU☆60Updated this week
- BMesh implementation☆11Feb 9, 2023Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Exports 3D structure and activity from NEURON simulator to Blender☆30Dec 23, 2025Updated 5 months ago
- Tools to work with the FlyWire connectome. Fully interoperable with navis.☆23May 21, 2026Updated 2 weeks ago
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆45Jul 28, 2025Updated 10 months ago
- ☆26Nov 14, 2020Updated 5 years ago
- Search, download, and prepare brain atlas data.☆17Mar 10, 2023Updated 3 years ago
- Code and performance tests to demonstrate the COUNTLESS algorithm. https://medium.com/@willsilversmith/countless-high-performance-2x-down…☆10Oct 23, 2019Updated 6 years ago
- ☆11Oct 1, 2024Updated last year
- Pytorch Implement of EE-Net (IEEE TIP)☆33Oct 26, 2023Updated 2 years ago
- Virtual Reality abstraction library with sample applications, based on Qt☆12May 10, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Blue Brain C++ File IO Library☆23Jun 27, 2023Updated 2 years ago
- Read and write Neuroglancer datasets programmatically.☆173Updated this week
- Performant, pure-Python subgraph isomorphism and monomorphism search (aka "motif search")☆66Aug 16, 2024Updated last year
- Read Becker & Hickl SDT files.☆14Feb 9, 2026Updated 4 months ago
- Compresso: Efficient Compression of Segmentation Data For Connectomics☆12Sep 7, 2021Updated 4 years ago
- Block-wise task scheduling for large nD volumes.☆32May 4, 2026Updated last month
- Find similarity (rigid body) transformation parameters, given two set of 3-D control points, using dual quaternions.☆16Apr 27, 2026Updated last month