connectome-neuprint / neuVidLinks
Generates neuroscience videos from high-level descriptions using Blender or VVDViewer.
☆33Updated 3 weeks ago
Alternatives and similar repositories for neuVid
Users that are interested in neuVid are comparing it to the libraries listed below
Sorting:
- A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing digital reconstructions of ne…☆136Updated 3 months ago
- Python library for analysis of neuroanatomical data.☆107Updated 2 weeks ago
- 3D/4D volumetric rendering of microscopy data☆26Updated 2 months ago
- ☆39Updated 4 months ago
- The NeuroMorph analysis and visualization toolkit☆67Updated last year
- MagellanMapper is a graphical interface for 3D bioimage annotation, atlas registration, and regional quantification☆22Updated 3 weeks ago
- Loading and handling microscopy data in blender☆148Updated 2 months ago
- This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.☆35Updated last month
- Rendering anatomical heatmaps with brainrender and matplotlib☆46Updated 3 weeks ago
- Goo is a Blender library for modeling biological cells, tissues, and embryos☆63Updated 6 months ago
- A Python package to download neuronal morphologies☆18Updated this week
- Read and write Neuroglancer datasets programmatically.☆170Updated this week
- NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions☆21Updated last week
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆43Updated 6 months ago
- Reconstruction of watertight meshes, annotated volumes and center line skeletons of neuroscience spatial structures from non-watertight i…☆32Updated last year
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆27Updated this week
- Segmentation of anatomical structures in a common coordinate space☆35Updated 3 weeks ago
- Utility to create a basic Python project structure with tests, CI etc.☆35Updated 3 weeks ago
- A simple SWC-file importer for Blender. This addon for Blender allows you to import files from e.g. neuromorpho.org.☆13Updated 2 years ago
- Native Qt interface for Meta's Segment Anything 2 in Images and Videos☆31Updated last year
- Marching Cubes & Mesh Simplification on multi-label 3D images.☆72Updated this week
- Spheroid models of morphogenesis for the GPU.☆45Updated 3 months ago
- A Python interface to access neuroanatomical atlases☆170Updated 2 weeks ago
- A python and C++ library for reading and writing neuronal morphologies☆28Updated 11 months ago
- A collection of notebooks to provide examples of using Microns-explorer.org datasets☆38Updated last year
- Block-wise task scheduling for large nD volumes.☆33Updated 10 months ago
- Flow-Registration toolbox for 2P motion compensation☆27Updated 4 months ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆64Updated last week
- ☆26Updated last week
- A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks☆112Updated 3 months ago