Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing, Hole Filling.
☆19Aug 25, 2026Updated 3 weeks ago
Alternatives and similar repositories for fastmorph
Users that are interested in fastmorph are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Serialize dict of integers to bytes and read with near zero parsing. Specialization for int to int.☆10Jun 26, 2026Updated 2 months ago
- Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data☆26Sep 11, 2026Updated last week
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆65Aug 23, 2026Updated 3 weeks ago
- Multiplatform 3D numpy image browser based viewer with voxel painting.☆16Apr 21, 2026Updated 5 months ago
- Marching Cubes & Mesh Simplification on multi-label 3D images.☆75Aug 25, 2026Updated 3 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Command line tool for registration of very large 3D volumes.☆16Jan 28, 2026Updated 7 months ago
- This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.☆39Sep 5, 2026Updated 2 weeks ago
- Deep Learning for EM Connectomics☆16Aug 18, 2022Updated 4 years ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆69Sep 12, 2026Updated last week
- Compresso: Efficient Compression of Segmentation Data For Connectomics☆14Sep 7, 2021Updated 5 years ago
- 3D Mitochondria Instance Segmentation with Spatio-Temporal Transformers☆14Apr 17, 2023Updated 3 years ago
- PyTorch Implementation of Global Neuron Shape Reasoning with Point Affinity Transformers☆14Mar 16, 2026Updated 6 months ago
- Reconstruction of watertight meshes, annotated volumes and center line skeletons of neuroscience spatial structures from non-watertight i…☆36Jan 3, 2025Updated last year
- WebGL-based viewer for volumetric data☆25Sep 12, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Open source volume electron microscopy (vEM) datasets for connectomics.☆19Aug 17, 2026Updated last month
- Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes☆89Aug 19, 2026Updated last month
- The mutex watershed for image segmentation.☆68May 6, 2021Updated 5 years ago
- A Python Toolbox for the analysis of electrophysiological data☆20Oct 24, 2025Updated 10 months ago
- ☆43Sep 1, 2025Updated last year
- Generates neuroscience videos from high-level descriptions using Blender or VVDViewer.☆35Mar 22, 2026Updated 5 months ago
- Automated Segmentation of cellular substructures in Electron Microscopy☆18Jan 28, 2026Updated 7 months ago
- ☆16Jan 23, 2024Updated 2 years ago
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆215Jul 24, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation☆54Jun 20, 2025Updated last year
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆46Jul 28, 2025Updated last year
- Python SDK for interacting with the BossDB REST API☆23Apr 18, 2025Updated last year
- Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries …☆464Aug 25, 2026Updated 3 weeks ago
- Python wrapper for Google's Draco mesh compression library.☆121Updated this week
- 使用了vuepress开发文档,预览地址:☆12Mar 5, 2022Updated 4 years ago
- Utilities for building and using the CEM dataset for unsupervised pre-training and downstream tasks.☆30Dec 30, 2022Updated 3 years ago
- Tools to work with the FlyWire connectome. Fully interoperable with navis.☆28Jul 9, 2026Updated 2 months ago
- ☆10Mar 6, 2020Updated 6 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆53Jul 12, 2024Updated 2 years ago
- Widgets/utils library to help with Tauri desktop bundle interaction☆15Sep 11, 2026Updated last week
- Flood filling networks for segmenting electron microscopy of neural tissue☆26Dec 26, 2022Updated 3 years ago
- 🌈☆70Oct 10, 2025Updated 11 months ago
- 结构光测量☆13Sep 20, 2019Updated 7 years ago
- moving least-squares for surface fitting☆44Nov 13, 2019Updated 6 years ago
- A repo for Masked Image Modeling for 3D Medical Images☆39Mar 14, 2023Updated 3 years ago