WebGL-based viewer for volumetric data
☆24Mar 5, 2026Updated this week
Alternatives and similar repositories for neuroglancer
Users that are interested in neuroglancer are comparing it to the libraries listed below
Sorting:
- ☆13Updated this week
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆66Updated this week
- Read and write Neuroglancer datasets programmatically.☆170Updated this week
- Marching Cubes & Mesh Simplification on multi-label 3D images.☆72Updated this week
- This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.☆35Feb 27, 2026Updated last week
- Information and python tools for the GridTape-TEM dataset of an adult female fly's Brain And Nerve Cord☆15Updated this week
- Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation☆55Jun 20, 2025Updated 8 months ago
- Tools to work with the FlyWire connectome. Fully interoperable with navis.☆20Feb 20, 2026Updated 2 weeks ago
- A library to facilitate machine learning on multi-dimensional images.☆88Mar 2, 2026Updated last week
- Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing, Hole Filling.☆19Oct 22, 2025Updated 4 months ago
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆63Dec 10, 2025Updated 2 months ago
- A collection of notebooks to provide examples of using Microns-explorer.org datasets☆40May 30, 2024Updated last year
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆43Jul 28, 2025Updated 7 months ago
- Serialize dict of integers to bytes and read with near zero parsing. Specialization for int to int.☆10Updated this week
- Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset☆13Dec 5, 2025Updated 3 months ago
- A unified framework for skeletonization, morphological analysis, and connectivity analysis.☆41Aug 23, 2024Updated last year
- Conversion of neuroimaging data for display in Neuroglancer☆31Sep 16, 2025Updated 5 months ago
- ☆12Mar 25, 2022Updated 3 years ago
- Image registration toolbox for Julia☆10Sep 3, 2019Updated 6 years ago
- Compresso: Efficient Compression of Segmentation Data For Connectomics☆12Sep 7, 2021Updated 4 years ago
- Simple watershed and agglomeration library for affinity graphs.☆28Sep 18, 2025Updated 5 months ago
- Distributed, Versioned, Image-oriented Dataservice☆201Jan 30, 2026Updated last month
- Command line tool for registration of very large 3D volumes.☆16Jan 28, 2026Updated last month
- jupyter notebook extension to visualize numpy arrays with the neuroglancer☆28Aug 28, 2018Updated 7 years ago
- Shared repo for EM connectomics and Array Tomography render based image processing modules☆17Mar 2, 2026Updated last week
- ☆16Nov 2, 2016Updated 9 years ago
- Software package for neuron reconstruction and visualization☆40May 27, 2025Updated 9 months ago
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆21Jan 9, 2026Updated 2 months ago
- Region Of Interest Classification and Tracking☆29Feb 5, 2026Updated last month
- WebGL-based viewer for volumetric data☆1,289Updated this week
- Connectome Reconstruction and Exploration Simple Tool☆19Jan 29, 2024Updated 2 years ago
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆190Jan 15, 2026Updated last month
- Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes☆84Nov 5, 2025Updated 4 months ago
- Tool for graph-based image segmentation and analysis☆22Nov 12, 2017Updated 8 years ago
- Python SDK for interacting with the BossDB REST API☆22Apr 18, 2025Updated 10 months ago
- motion correction☆17Jan 27, 2023Updated 3 years ago
- View connectomic data stored in neuPrint☆26Nov 19, 2025Updated 3 months ago
- SharkViewer is a web-based viewer for SWC neuron files. It is written entirely in JavaScript using Three.js.☆24Jan 8, 2023Updated 3 years ago
- Python library for analysis of neuroanatomical data.☆111Mar 2, 2026Updated last week