Alternatives and similar repositories for intern:

Users that are interested in intern are comparing it to the libraries listed below

• CAVEconnectome / PyChunkedGraph
  Data backend for fast proofreading of cell segmentations in connectomics datasets
  ☆23Updated last week
• seung-lab / igneous
  Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.
  ☆48Updated 2 weeks ago
• YuelongWu / feabas
  Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data
  ☆16Updated this week
• funkelab / daisy
  Block-wise task scheduling for large nD volumes.
  ☆30Updated last month
• CAVEconnectome / nglui
  ☆12Updated last month
• InsightSoftwareConsortium / GetYourBrainTogether
  Get Your Brain Together Neuroimage Registration Workshops and Hackathons
  ☆20Updated 5 months ago
• AllenCell / napari-allencell-segmenter
  A plugin that enables image segmentation provided by Allen Institute for Cell Science
  ☆16Updated last year
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆23Updated 2 months ago
• allen-cell-animated / agave
  ☆41Updated this week
• funkey / nyroglancer
  jupyter notebook extension to visualize numpy arrays with the neuroglancer
  ☆27Updated 6 years ago
• neuroscales / nifti-zarr
  A draft specification for the nifti-zarr format
  ☆14Updated last month
• navis-org / fafbseg-py
  Tools to work with the FlyWire connectome. Fully interoperable with navis.
  ☆13Updated 3 weeks ago
• StructuralNeurobiologyLab / SyConn
  Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.
  ☆41Updated 10 months ago
• mobie / mobie
  MultiModal Big Image Data Sharing and Exploration
  ☆14Updated 2 years ago
• JaneliaSciComp / VVDViewer
  3D/4D volumetric rendering of microscopy data
  ☆23Updated this week
• haesleinhuepf / napari-assistant
  ☆24Updated last week
• chanzuckerberg / napari-plugin-alfa-cohort
  Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration
  ☆11Updated 3 years ago
• JaneliaSciComp / JaneliaDataStandards
  A pilot experiment to dissminate information about Janelia's biomaging data formats.
  ☆11Updated 3 months ago
• constantinpape / pybdv
  python tools for BigDataViewer
  ☆22Updated 4 months ago
• haesleinhuepf / natari
  Napari gaming
  ☆17Updated 3 years ago
• CAVEconnectome / MeshParty
  ☆36Updated last month
• saalfeldlab / stitching-spark
  Reconstruct big images from overlapping tiled images on a Spark cluster.
  ☆35Updated last year
• tlambert03 / napari-ndtiffs
  A napari plugin to load & deskew folders of lattice light sheet TIFFs
  ☆13Updated last month
• napari-threedee / napari-threedee
  A 3D interactivity toolbox for napari
  ☆34Updated 2 weeks ago
• guiwitz / naparimovie
  Create movies from series of key-frames in napari.
  ☆38Updated 3 years ago
• int-brain-lab / atlas
  Brain flatmaps generation
  ☆11Updated 2 years ago
• alisterburt / napari-workshops
  A JupyterBook site for napari workshop materials
  ☆11Updated 2 years ago
• brainglobe / brainglobe-registration
  Registration to BrainGlobe atlases in napari using Elastix
  ☆22Updated this week
• ome / ome2024-ngff-challenge
  Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data
  ☆19Updated 3 weeks ago
• clEsperanto / napari_pyclesperanto_assistant
  GPU-accelerated general purpose image processing and image analysis in napari
  ☆35Updated last week