Python SDK for interacting with the BossDB REST API
☆23Apr 18, 2025Updated last year
Alternatives and similar repositories for intern
Users that are interested in intern are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17Jul 6, 2023Updated 3 years ago
- python interface to neurodata code☆18Jul 15, 2019Updated 7 years ago
- A contrastive learning framework for 3D electron microscopy data☆13Jan 17, 2023Updated 3 years ago
- Generate multiresolution neuroglancer meshes and skeletons from segmentation volumes (zarr, N5, precomputed), parallelized with Dask.☆13Updated this week
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆27Updated this week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆43Sep 1, 2025Updated last year
- Read and write Neuroglancer datasets programmatically.☆176Oct 27, 2026Updated last week
- Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset☆17Oct 18, 2026Updated 2 weeks ago
- Asynchronous serverless task queue with timed leasing of tasks. Threaded implementations for SQS and local filesystem.☆41Oct 30, 2026Updated last week
- A set of tools to assist in aligning (registering) large numbers of EM images into a coherent image volume in two and three dimensions.☆16Apr 13, 2019Updated 7 years ago
- This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.☆45Sep 5, 2026Updated 2 months ago
- Umbrella package to help install/load nat packages☆11Mar 9, 2026Updated 7 months ago
- Mesh generation, skeletonization, voxelization of sparse 3D data.☆26Aug 9, 2026Updated 2 months ago
- Shared repo for EM connectomics and Array Tomography render based image processing modules☆18Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Python TEASAR Skeletonization for Sparse Labels☆10Jul 8, 2023Updated 3 years ago
- Storing and accessing large Julia array locally or in cloud storage without server.☆13Jan 29, 2022Updated 4 years ago
- Distributed Gradient-Domain Processing of Planar and Spherical Images☆27Dec 30, 2020Updated 5 years ago
- scripts for using spark on janelia's cluster☆12Nov 12, 2023Updated 2 years ago
- Compresso: Efficient Compression of Segmentation Data For Connectomics☆14Sep 7, 2021Updated 5 years ago
- Reconstruction of watertight meshes, annotated volumes and center line skeletons of neuroscience spatial structures from non-watertight i…☆37Jan 3, 2025Updated last year
- Tools to work with the FlyWire connectome. Fully interoperable with navis.☆29Oct 26, 2026Updated last week
- Main repo for the Boss API☆21Nov 21, 2024Updated last year
- Block-wise task scheduling for large nD volumes.☆34Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆65Oct 18, 2026Updated 2 weeks ago
- A unified framework for skeletonization, morphological analysis, and connectivity analysis.☆44Aug 23, 2024Updated 2 years ago
- code for storing neurodata images and image annotations☆37Oct 1, 2017Updated 9 years ago
- Render transformed image tiles☆37Oct 30, 2026Updated last week
- ☆13Sep 23, 2026Updated last month
- Browse your OMERO database from within napari.☆41Updated this week
- WebGL-based viewer for volumetric data☆25Updated this week
- jupyter notebook extension to visualize numpy arrays with the neuroglancer☆28Aug 28, 2018Updated 8 years ago
- Conversion of neuroimaging data for display in Neuroglancer☆31Aug 19, 2026Updated 2 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Your favorite Python graph libraries, scalable and interoperable. Graph databases in memory, and familiar graph APIs for cloud databases.☆118Jul 28, 2026Updated 3 months ago
- Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing, Hole Filling.☆19Oct 30, 2026Updated last week
- A framework for easy application of established machine learning techniques on large, multi-dimensional images.☆61Apr 24, 2026Updated 6 months ago
- An embedded in-memory openCypher implementation for Go☆18Jan 21, 2024Updated 2 years ago
- 3D dense segmentation compression codec based on crack codes.☆18Updated this week
- Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data☆29Updated this week
- Python library for analysis of neuroanatomical data.☆140Updated this week