Alternatives and similar repositories for intern

Users that are interested in intern are comparing it to the libraries listed below

• CAVEconnectome / PyChunkedGraph
  Data backend for fast proofreading of cell segmentations in connectomics datasets
  ☆24Updated last week
• seung-lab / igneous
  Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.
  ☆55Updated last week
• YuelongWu / feabas
  Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data
  ☆18Updated 3 weeks ago
• CAVEconnectome / nglui
  ☆12Updated 2 months ago
• funkelab / daisy
  Block-wise task scheduling for large nD volumes.
  ☆32Updated 7 months ago
• seung-lab / fastremap
  Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.
  ☆63Updated last month
• seung-lab / cloud-volume
  Read and write Neuroglancer datasets programmatically.
  ☆160Updated this week
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆23Updated 7 months ago
• funkelab / gunpowder
  A library to facilitate machine learning on multi-dimensional images.
  ☆86Updated 3 weeks ago
• pyapp-kit / ndv
  Simple, fast-loading, n-dimensional array viewer with minimal dependencies.
  ☆81Updated this week
• kirchhausenlab / incasem
  Automated Segmentation of cellular substructures in Electron Microscopy
  ☆18Updated 7 months ago
• allen-cell-animated / agave
  ☆52Updated this week
• guiwitz / naparimovie
  Create movies from series of key-frames in napari.
  ☆38Updated 4 years ago
• napari / napari.github.io
  website for the napari image viewer
  ☆46Updated this week
• JaneliaSciComp / bigstream
  Tools for distributed alignment of massive images
  ☆87Updated last month
• AllenCell / napari-allencell-segmenter
  A plugin that enables image segmentation provided by Allen Institute for Cell Science
  ☆17Updated 2 weeks ago
• CAVEconnectome / MeshParty
  ☆38Updated 2 months ago
• napari / napari-animation
  A napari plugin for making animations
  ☆90Updated 3 weeks ago
• constantinpape / elf
  Utils and convenience functions for large-scale bio-image analysis.
  ☆58Updated 2 months ago
• abcucberkeley / PetaKit5D
  ☆47Updated last week
• tlambert03 / napari-ndtiffs
  A napari plugin to load & deskew folders of lattice light sheet TIFFs
  ☆13Updated 3 weeks ago
• StructuralNeurobiologyLab / SyConn
  Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.
  ☆42Updated 3 months ago
• haesleinhuepf / napari-assistant
  ☆33Updated 5 months ago
• haesleinhuepf / natari
  Napari gaming
  ☆17Updated 3 years ago
• chanzuckerberg / napari-plugin-alfa-cohort
  Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration
  ☆11Updated 4 years ago
• e11bio / volara
  ☆43Updated 3 weeks ago
• bioimage-io / spec-bioimage-io
  Specification for the bioimage.io model description file.
  ☆21Updated this week
• seung-lab / neuroglancer
  WebGL-based viewer for volumetric data
  ☆24Updated last week
• alisterburt / napari-workshops
  A JupyterBook site for napari workshop materials
  ☆11Updated 3 years ago
• neuroscales / nifti-zarr
  A draft specification for the nifti-zarr format
  ☆16Updated 6 months ago