Alternatives and similar repositories for countless

Users that are interested in countless are comparing it to the libraries listed below

• seung-lab / fill_voids
  Fill holes in binary 2D & 3D images fast.
  ☆28Updated 3 months ago
• jni / ray
  Automatic segmentation of electron microscopy volumes
  ☆30Updated 13 years ago
• inferno-pytorch / firelight
  A visualization library for PyTorch tensors
  ☆19Updated 2 years ago
• BrancoLab / imgreg2D
  2D image registration in python, using napari.
  ☆16Updated 4 years ago
• seung-lab / torchfields
  A PyTorch add-on for working with image mappings and displacement fields, including Spatial Transformers
  ☆51Updated 3 years ago
• DerThorsten / nifty
  A nifty library for graph based image segmentation.
  ☆46Updated 8 months ago
• jeanfeydy / lddmm-ot
  MICCAI 2017 Paper - Optimal Transport for Diffeomorphic Registration
  ☆56Updated 6 years ago
• abnan / DRMIME
  DRMIME - Differentiable Mutual Information and Matrix Exponential for Multi-Resolution Image Registration
  ☆46Updated 5 years ago
• adwanner / PyKNOSSOS
  PyKNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for high-throughput image annotation…
  ☆18Updated 5 years ago
• pyimreg / python-register
  Linear and non-linear image registration methods, using scipy and numpy.
  ☆63Updated 12 years ago
• petteriTeikari / vesselNN
  vesselNN
  ☆13Updated 9 years ago
• berendkleinhaneveld / Registrationshop
  Interactive registration tool for 3D medical datasets
  ☆33Updated last year
• eisen-ai / eisen-core
  Core functionality of Eisen
  ☆42Updated 5 years ago
• ELEKTRONN / ELEKTRONN
  A highly configurable toolkit for training 3D/2D CNNs and general Neural Networks (superceded by https://github.com/ELEKTRONN/elektronn3)
  ☆40Updated 3 years ago
• VirtualPlants / timagetk
  3D and 2D Image processing algorithms in Python for tissues
  ☆13Updated last year
• MIC-DKFZ / Hyppopy
  Hyppopy is a python toolbox for blackbox optimization. It's purpose is to offer a unified and easy to use interface to a collection of so…
  ☆27Updated 3 years ago
• google-deepmind / multidim-image-augmentation
  This package provides TensorFlow Ops for multidimensional volumetric image augmentation.
  ☆137Updated 4 months ago
• jacobhinkle / lagomorph
  Image Registration and Computational Anatomy in PyTorch
  ☆21Updated 4 years ago
• dtward / image_lddmm_tensorflow
  Image mapping using the LDDMM algorithm, implemented in tensorflow
  ☆17Updated 4 years ago
• KitwareMedical / tensorboard-plugin-3d
  ☆36Updated 3 years ago
• juglab / VoidSeg
  Notebooks for VoidSeg
  ☆17Updated 5 years ago
• airlab-unibas / MICCAITutorial2019
  ☆15Updated 6 years ago
• SuperElastix / SuperElastix
  Official SuperElastix repository
  ☆88Updated 6 years ago
• TuragaLab / malis
  MALIS structured loss function for supervised learning of segmentation and clustering
  ☆18Updated 2 years ago
• royerlab / ssi-code
  Image Deconvolution via Noise-Tolerant Self-Supervised Inversion
  ☆30Updated last year
• martanunez / LA_flattening
  Implementation of quasi-conformal regional flattening of the left atrium
  ☆13Updated 2 years ago
• path-openings / RORPO
  Ranking Operator Response of Path Openings
  ☆29Updated last month
• seung-lab / neuroglancer
  WebGL-based viewer for volumetric data
  ☆24Updated 2 weeks ago
• axondeepseg / axondeepseg
  Axon/Myelin segmentation using Deep Learning
  ☆123Updated 3 weeks ago
• funalab / QCANet
  Convolutional Neural Network-Based Instance Segmentation Algorithm to Acquire Quantitative Criteria of Early Mouse Development
  ☆32Updated 2 years ago