aschampion / diluvianLinks
Flood filling networks for segmenting electron microscopy of neural tissue
☆23Updated 2 years ago
Alternatives and similar repositories for diluvian
Users that are interested in diluvian are comparing it to the libraries listed below
Sorting:
- Utils and convenience functions for large-scale bio-image analysis.☆57Updated last week
- Distributed segmentation for bio-image-analysis☆38Updated 2 months ago
- Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data☆16Updated 3 weeks ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆50Updated 2 weeks ago
- A library to facilitate machine learning on multi-dimensional images.☆85Updated this week
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆41Updated 2 weeks ago
- A set of tools to assist in aligning (registering) large numbers of EM images into a coherent image volume in two and three dimensions.☆13Updated 6 years ago
- ☆21Updated 4 years ago
- Python module for registering and fusing multi-view microscopy data☆23Updated 5 months ago
- Tools for handling FIB-SEM data and annotations☆22Updated 4 months ago
- Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…☆19Updated 4 years ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 5 months ago
- Napari gaming☆17Updated 3 years ago
- Simple watershed and agglomeration library for affinity graphs.☆25Updated 8 months ago
- Multi-Object Tracker using Integer Linear Equations☆37Updated last month
- ☆10Updated last year
- Optimize image processing workflows in napari☆18Updated 3 months ago
- Affinity based segmentation algorithms and tools☆10Updated 2 months ago
- 🌈☆59Updated 4 months ago
- GPU-accelerated general purpose image processing and image analysis in napari☆35Updated 3 months ago
- Semi automated image analysis toolkit for Connectomics☆12Updated 5 years ago
- Python module to analyse skeleton (thin object) images☆128Updated 3 weeks ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆25Updated 5 years ago
- Tools for distributed alignment of massive images☆85Updated 2 weeks ago
- Read and write Neuroglancer datasets programmatically.☆156Updated 2 weeks ago
- A napari plugin for making animations☆87Updated 2 weeks ago
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆161Updated 2 weeks ago
- Block-wise task scheduling for large nD volumes.☆32Updated 4 months ago
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- Deep Learning for EM Connectomics☆15Updated 2 years ago